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Job DescriptionP37127
Confidence99.66%DateThu Jan 5 11:54:48 GMT 2012
Rank127Aligned Residues264
% Identity15%Templated1neka2
SCOP infoFAD/NAD(P)-binding domain FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
Resolution2.60

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
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   324.....330.........340.........350.........360..... ....370.........380.........390.......
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Query Sequence  TKVDKRVAIIGAGPAGLACADVLTRNGVGVTVYDRHPEIGGL. . . . . . LTFGIPSFKLDKSLLARRREIFSAMGIHFELN
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Template Sequence  PVREFDAVVIGAGGAGMRAALQISQSGQTCALLSKVFPTRSHTVSAQGGITVALGNTHEDNWEWHMYDTVKGSDYIGDQD
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S


STT



SS
GGGSGGGG

S




SSS


TS
S
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   4.....10.........20.........30.........40.........50.........60.........70.........80...
 
   398.400.........410.........420.........430.........440.........450.........460.........470.......
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Query Sequence  CEVGKDVSLDSLLEQYDAVFVGVGTYRSMKAGLPNEDAPGVYDALPFLIANTKQVMGLEELPEEPFINTAGLNVVVLGGG
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Template Sequence  AIEYMCKTGPEAILELEHMGLPFSRLDDGRIYQRPFGGQSKNFGGEQA. . . . . . . . . . . . . . . . . . . . . . . . ARTAAAAD
Template Known Secondary structure  TT



B
S
BTTB


SSB

TTSSS........................

TT
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   84.....90.........100.........110.........120.........130. ........
 
   478.480.........490.........500.........510.........520.........530.........540.........550.......
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Query Sequence  DTAMDCVRTALRHGASNVTCAYRRDEANMPGSKKEVKNAREEGANFEFNVQPVALELNEQGHVCGIRFLRTRLGEPDAQG
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Template Sequence  RTGHALLHTLYQQ. . . . . . . . . . . . . . . . . . . . . . . . . NLKNHTTIFSEWYALDLVKNQDGAVVGCTALCIE. . . . . . . .
Template Known Secondary structure 
.........................TT

S
TTS
TT........
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   140.........150.. .......160.........170.........180......
 
   558.560.........570.........580. ........590.........600.........610. .....
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Query Sequence  RRRPVPVEGSEFVMPADAVIMAFG. . . . . . . . . . . . . . FNPHGMPWLESHGVTVDKWGRIIADVESQY. . . . . . . RYQTT
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Template Sequence  . . . . . . . TGEVVYFKARATVLATGGAGRIYQSTTNAHINTGDGVGMAIRAGVPVQDMMGGIPTKVTGQALTVNEKGEDVV
Template Known Secondary structure  .......T

S





GGGSSS
SS
TT
S
TTT


B



BB
TT

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   187..190.........200.........210.........220.........230.........240.........250.........
 
   617..620........ .630.........640.........650.
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Query Sequence  NPKIFAGGDAVR. . . . . . . . . GADLVVTAMAEGRHAAQGIIDWL
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Template Sequence  VPGLFAVGEIACVSVHGANRLGGNSLLDLVVFGRAAGLHLQESI
Template Known Secondary structure 
SSS
SSSTTS

TT
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   380.........390.........400.........410.........420...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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