 |
Job Description | P37127 | Confidence | 96.29% | Date | Thu Jan 5 11:54:48 GMT 2012 |
Rank | 449 | Aligned Residues | 77 |
% Identity | 21% | Template | d1hyha1 |
SCOP info | NAD(P)-binding Rossmann-fold domains
| NAD(P)-binding Rossmann-fold domains
| LDH N-terminal domain-like
|
Resolution | 2.20 |
|
 |
  |   |
328 | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | R | V | A | I | I | G | A | G | P | A | G | L | A | C | A | D | V | L | T | R | N | G | V | G | V | T | V | Y | D | R | H | P | E | I | G | G | L | L | T | F | G | I | P | S | F | K | L | D | K | S | L | L | A | R | R | R | E | I | F | S | A | M | G | I | H | F | E | L | N | C | E | V | G | K | D | V | S | L | D |
Query Conservation |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
|
|
|   |
|   |   |
|
|
|   |
|
|   |   |   |   |
|
|   |
|   |   |
|
|
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|   |   |   |   |
|   |   |
|
|   |
|   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
Template Conservation |   |
|
|
|   |
|
|
|
|
|   |
|
|   |   |   |
|   |   |
|
|   |   |   |   |   |   |   |
|   |   |   |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . |   |   |   |
Template Sequence |   |
R | K | I | G | I | I | G | L | G | N | V | G | A | A | V | A | H | G | L | I | A | Q | G | V | A | D | D | Y | V | F | I | D | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
A | N | E | A | K | V | K | A | D | Q | I | D | F | Q | D | A | M | A | N | L | E | A | H | G | N | I | V | I | . |
. |
N | D | W |
Template Known Secondary structure |   |
|  |  |  |  |  |
|
| S |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
| S |  |  |  |  |  |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  | G | G | G | S | S | S |
|
|  |  |  |  | . | . | S |
| G |
Template Predicted Secondary structure |   |
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
| . | . |
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
22 | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | |
|
. | . | . |
  |
  |   |
408 | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . |
Predicted Secondary structure |   |
 |  |
|
|
|
|
|  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | L | L | E | Q | Y | D | A | V | F | V | G | V | G |
Query Conservation |   |
  |
|   |   |   |   |
|
|
|   |   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|   |   |
|
|
|
|
|
|   |   |   |
Template Sequence |   |
A | A | L | A | D | A | D | V | V | I | S | T | L | G |
Template Known Secondary structure |   |
G | G | G | T | T |
| S |  |  |  |  |
|
| S |
Template Predicted Secondary structure |   |
 |  |  |
|
|
|
|  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
85 | . | . | . | . | 90 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|