Job Description P37127 Confidence 99.97% Date Thu Jan 5 11:54:48 GMT 2012 Rank 31 Aligned Residues 298 % Identity 21% Template c3urhB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:dihydrolipoyl dehydrogenase; PDBTitle: crystal structure of a dihydrolipoamide dehydrogenase from2 sinorhizobium meliloti 1021 Resolution 1.90 Å

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		329	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.																																	.	.	.	.	.	370	.	.	.	.	.	.
Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	V	A	I	I	G	A	G	P	A	G	L	A	C	A	D	V	L	T	R	N	G	V	G	V	T	V	Y	D	R	H	P	E	I	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	L	T	F	G	I	P	S	F	K	L	D
Query Conservation																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	L	I	V	I	G	S	G	P	G	G	Y	V	C	A	I	K	A	A	Q	L	G	X	K	V	A	V	V	E	K	R	S	T	Y	G	G	T	C	L	N	V	G	C	I	P	S	K	A	L	L	H	A	S	E	X	F	H	Q	A	Q	H	G	L	E	A	L	G	V	E	V	A	N	P	K	L	N	L	Q	K	X
Template Known Secondary structure									S													T	T								S	S	S	S	S	S							S																				S	S	G	G	G	T					S
Template Predicted Secondary structure
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		377	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	S	L	L	A	R	R	R	E	I	F	S	A	M	G	I	H	F	E	L	N	C	E	V	G	K	D	V	S	L	D	S	L	L	E	Q	Y	D	A	V	F	V	G	V	G	T	Y	R	S	M	K	A	G	L	P	N	E	D	A	P	G	V	Y	D	A	L	P	F	L	I	A	N	T	K	Q	V	M	G	L	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		X	A	H	K	D	A	T	V	K	S	N	V	D	G	V	S	F	L	F	K	K	N	K	I	D	G	F	Q	G	T	G	K	V	L	G	Q	G	K	V	S	V	T	N	E	K	G	E	E	Q	V	L	E	A	K	N	V	V	I	A	T	G	S	D	V	A	G	I	P	G	V	E	V	A	F	D	E	K	T	I	V
Template Known Secondary structure																							T	T						S							T	T							T	T	S								S													B	T	T	B						S	S	S
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		457	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.					.	520	.	.	.	.	.	.	.	.	.	530	.	.
Predicted Secondary structure																																																																.	.	.	.
Query SS confidence																																																																.	.	.	.
Query Sequence		E	L	P	E	E	P	F	I	N	T	A	G	L	N	V	V	V	L	G	G	G	D	T	A	M	D	C	V	R	T	A	L	R	H	G	A	S	N	V	T	C	A	Y	R	R	D	E	A	N	M	P	G	S	K	K	E	V	K	N	A	R	E	.	.	.	.	E	G	A	N	F	E	F	N	V	Q	P	V	A	L
Query Conservation																																																																.	.	.	.
Alig confidence																																						.																										.	.	.	.
Template Conservation																																						.
Template Sequence		S	S	T	G	A	L	A	L	E	K	V	P	A	S	X	I	V	V	G	G	G	V	I	G	L	E	L	G	S	V	W	A	R	L	G	A	.	K	V	T	V	V	E	F	L	D	T	I	L	G	G	X	D	G	E	V	A	K	Q	L	Q	R	X	L	T	K	Q	G	I	D	F	K	L	G	A	K	V	T	G	A
Template Known Secondary structure							T	S		S	S			S								S													T	T		.							S	S	S	S	S	S	T	T	S															T	T						S
Template Predicted Secondary structure																																						.
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
		533	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.		590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.
Predicted Secondary structure																																																											.
Query SS confidence																																																											.
Query Sequence		E	L	N	E	Q	G	H	V	C	G	I	R	F	L	R	T	R	L	G	E	P	D	A	Q	G	R	R	R	P	V	P	V	E	G	S	E	F	V	M	P	A	D	A	V	I	M	A	F	G	F	N	P	H	G	M	P	W	.	L	E	S	H	G	V	T	V	D	K	W	G	R	I	I	A	D	V	E	S	Q	Y
Query Conservation																																																											.
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.																			.	.	.	.
Template Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																												.	.	.	.
Template Sequence		V	K	S	G	D	G	A	K	V	T	F	E	P	V	K	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	E	A	T	T	L	D	A	E	V	V	L	I	A	T	G	R	K	P	S	T	D	G	L	G	L	A	K	A	G	V	V	L	D	S	R	G	R	V	E	I	D	R	.	.	.	.
Template Known Secondary structure					T	T									S	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									S													T	T	S						T			B		T	T	S		B				T	.	.	.	.
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																												.	.	.	.
Template SS confidence
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.																		.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.
		612	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	Y	Q	T	T	N	P	K	I	F	A	G	G	D	A	V	R	G	A	D	L	V	V	T	A	M	A	E	G	R	H	A	A	Q	G	I	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	F	Q	T	S	I	A	G	V	Y	A	I	G	D	V	V	R	G	P	X	L	A	H	K	A	E	D	E	G	V	A	V	A	E	I	I	A
Template Known Secondary structure		T	S	B		S	S	T	T					G	G	G	S	S	S																			T
Template Predicted Secondary structure
Template SS confidence
		302	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions