Job Description P37127 Confidence 99.94% Date Thu Jan 5 11:54:48 GMT 2012 Rank 88 Aligned Residues 303 % Identity 18% Template c3s5wB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:l-ornithine 5-monooxygenase; PDBTitle: ornithine hydroxylase (pvda) from pseudomonas aeruginosa Resolution 1.90 Å

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		329	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.						.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	V	A	I	I	G	A	G	P	A	G	L	A	C	A	D	V	L	.	.	.	.	.	T	R	N	G	V	G	V	T	V	Y	D	R	H	P	E	I	G	G	L	L	T	F	G	I	P	S	F	K	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																				.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	L	I	G	V	G	F	G	P	S	N	I	A	L	A	I	A	L	Q	E	R	A	Q	A	Q	G	A	L	E	V	L	F	L	D	K	Q	G	D	Y	R	W	H	G	N	T	L	V	S	Q	S	E	L	Q	I	S	F	L	K	D	L	V	S	L	R	N	P	T	S	P	Y	S	F	V	N	Y	L	H	K	H	D
Template Known Secondary structure		S							S																											S		S	S			S	S	G	G	G			S	S		B		S	S		G	G	G	S	S	S	T	T	T		T	T	S	T	T	S								T	T
Template Predicted Secondary structure
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
																376	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400				.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	K	S	L	L	A	R	R	R	E	I	F	S	A	M	G	I	H	F	E	L	N	C	E	V	.	.	.	G	K	D	V	S	L	D	S	L	L	E	Q	Y	D	A	V	F	V	G	V	G	T	Y	R	S	M	K	A	G	L	P	N	E	D	A	P	G	V
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.
Template Conservation
Template Sequence		R	L	V	D	F	I	N	L	G	T	F	Y	P	C	R	M	E	F	N	D	Y	L	R	W	V	A	S	H	F	Q	E	Q	S	R	Y	G	E	E	V	L	R	I	E	P	M	L	S	A	G	Q	V	E	A	L	R	V	I	S	R	N	A	D	G	E	E	L	V	R	T	T	R	A	L	V	V	S	P	G	G	T
Template Known Secondary structure										T		S			B													G	G	G	T	T	T				S												T	T												T	T	S								S
Template Predicted Secondary structure
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
		439	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.		.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																							.																			.	.	.	.	.	.	.	.
Query SS confidence																																																							.																			.	.	.	.	.	.	.	.
Query Sequence		Y	D	A	L	P	F	L	I	A	N	T	K	Q	V	M	G	L	E	E	L	P	E	E	P	F	I	N	T	A	G	L	N	V	V	V	L	G	G	G	D	T	A	M	D	C	V	R	T	A	L	R	H	G	.	A	S	N	V	T	C	A	Y	R	R	D	E	A	N	M	P	G	S	.	.	.	.	.	.	.	.
Query Conservation																																																							.																			.	.	.	.	.	.	.	.
Alig confidence																									.																														.																			.	.	.	.	.	.	.	.
Template Conservation																									.
Template Sequence		P	R	I	P	Q	V	F	R	A	L	K	G	D	G	R	V	F	H	H	S	Q	Y	L	.	E	H	M	A	K	P	M	K	I	A	I	I	G	G	G	Q	S	A	A	E	A	F	I	D	L	N	D	S	Y	P	S	V	Q	A	D	M	I	L	R	A	S	A	L	K	P	A	D	D	S	P	F	V	N	E	V	F
Template Known Secondary structure						G	G	G	G	G	G	T	T		T	T				G	G	G			.				T											S															T	T								S	S	S	S			B					T	T	G	G	G	G	G
Template Predicted Secondary structure																									.
Template SS confidence
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.		.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
														510	.	.	.	.	.	.	.	.	.																															520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	K	K	E	V	K	N	A	R	E	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	A	N	F	E	F	N	V	Q	P	V	A	L	E	L	N	E	Q	G	H	V	C	G	I	R	F	L	R
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	P	K	F	T	D	L	I	Y	S	R	E	H	A	E	R	E	R	L	L	R	E	Y	H	N	T	N	Y	S	V	V	D	T	D	L	I	E	R	I	Y	G	V	F	Y	R	Q	K	V	S	G	I	P	R	H	A	F	R	C	M	T	T	V	E	R	A	T	A	T	A	Q	G	I	E	L	A	L	R	D	A	G
Template Known Secondary structure		S									T	S												T	G	G	G	T	S	S		B																			T				S				T	T										S	S	S								T	T
Template Predicted Secondary structure
Template SS confidence
		258	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.
		548	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		T	R	L	G	E	P	D	A	Q	G	R	R	R	P	V	P	V	E	G	S	E	F	V	M	P	A	D	A	V	I	M	A	F	G	F	N	P	H	G	M	P	W	L	E	S	H	G	V	T	V	D	K	W	G	R	I	I	A	D	V	E	S	Q	Y	R	Y	Q	T	T	N	P	K	I	F	A	G	G	D	A	.
Query Conservation																																																																																	.
Alig confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																.														.
Template Conservation			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																.
Template Sequence		S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	E	L	S	V	E	T	Y	D	A	V	I	L	A	T	G	Y	E	R	Q	L	H	R	Q	L	L	E	P	L	A	E	Y	L	G	D	H	E	I	G	R	D	Y	R	L	Q	T	D	.	E	R	C	K	V	A	I	Y	A	Q	G	F	S	Q
Template Known Secondary structure		T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									S												S	S	S	S	S	S	G	G	G	G	G	G	B		S	S				T	T	S	B			B		.	T	T	B		S					S	S
Template Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																.
Template SS confidence
		338																		.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.		.	.	.	.	390	.	.	.	.	.	.	.	.	.
						627	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.
Predicted Secondary structure		.	.	.	.
Query SS confidence		.	.	.	.
Query Sequence		.	.	.	.	V	R	G	A	D	L	V	V	T	A	M	A	E	G	R	H	A	A	Q	G	I	I	D	W	L
Query Conservation		.	.	.	.
Alig confidence		.	.	.	.																.
Template Conservation																					.
Template Sequence		A	S	H	G	L	S	D	T	L	L	S	V	L	P	V	R	A	E	E	.	I	S	G	S	L	Y	Q	H	L
Template Known Secondary structure						T	T	T	T	S	S	T	T								.
Template Predicted Secondary structure																					.
Template SS confidence
		400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.		.	420	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions