Job Description P37127 Confidence 99.96% Date Thu Jan 5 11:54:48 GMT 2012 Rank 47 Aligned Residues 297 % Identity 19% Template c3lzxB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:ferredoxin--nadp reductase 2; PDBTitle: crystal structure of ferredoxin-nadp+ oxidoreductase from bacillus2 subtilis (form ii) Resolution 1.90 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		329	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.											.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	V	A	I	I	G	A	G	P	A	G	L	A	C	A	D	V	L	T	R	N	G	V	G	V	T	V	Y	D	R	H	P	E	I	G	G	L	L	T	F	G	I	P	S	F	K	L	.	.	.	.	.	.	.	.	.	.	D	K	S	L	L	A	R	R	R	E	I	F	S	A	M	G	I	H	F	E	L	N	C
Query Conservation																																																	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	I	T	I	I	G	G	G	P	V	G	L	F	T	A	F	Y	G	G	M	R	Q	A	S	V	K	I	I	E	S	L	P	Q	L	G	G	Q	L	S	A	L	Y	P	E	K	Y	I	Y	D	V	A	G	F	P	K	I	R	A	Q	E	L	I	N	N	L	K	E	Q	M	A	K	F	D	Q	T	I	C	L	E	Q
Template Known Secondary structure									S													T	T								S	S	S	S	S									T	T	S					S	T	T		S	S															T	T	S							S
Template Predicted Secondary structure
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
		399	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	V	G	K	D	V	S	L	D	S	L	L	E	Q	Y	D	A	V	F	V	G	V	G	T	Y	R	S	M	K	A	G	L	P	N	E	D	A	P	G	V	Y	D	A	L	P	F	L	I	A	N	T	K	Q	V	M	G	L	E	E	L	P	E	E	P	F	I	N	T	A	G	L	N	V	V	V	L	G	G	G	D
Query Conservation
Alig confidence				.	.	.	.
Template Conservation				.	.	.	.
Template Sequence		A	V	.	.	.	.	E	S	V	E	K	Q	A	D	G	V	F	K	L	V	T	N	E	E	T	H	Y	S	K	T	V	I	I	T	A	G	N	G	A	F	K	P	R	K	L	E	L	E	N	A	E	Q	Y	E	G	K	N	L	H	Y	F	V	D	D	L	Q	K	F	A	G	R	R	V	A	I	L	G	G	G	D
Template Known Secondary structure				.	.	.	.							T	T	S							S	S													T	T	S										T	T	G	G	G	G	B	T	T	T			S	S				G	G	G	G	T	T	S							S	S
Template Predicted Secondary structure				.	.	.	.
Template SS confidence
		89	90					.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		479	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	A	M	D	C	V	R	T	A	L	R	H	G	A	S	N	V	T	C	A	Y	R	R	D	E	A	N	M	P	G	S	K	K	E	V	K	N	A	R	E	E	G	A	N	F	E	F	N	V	Q	P	V	A	L	E	L	N	E	Q	G	H	V	C	G	I	R	F	L	R	T	R	L	G	E	P	D	A	Q	G	R
Query Conservation
Alig confidence																.										.	.																														.	.															.	.	.	.	.	.	.	.	.
Template Conservation																.										.	.																														.	.															.	.	.	.	.	.	.	.	.
Template Sequence		S	A	V	D	W	A	L	M	L	E	P	I	A	K	.	E	V	S	I	I	H	R	R	D	.	.	K	F	R	A	H	E	H	S	V	E	N	L	H	A	S	K	V	N	V	L	T	P	F	V	P	A	E	L	I	.	.	G	E	D	K	I	E	Q	L	V	L	E	E	V	K	.	.	.	.	.	.	.	.	.
Template Known Secondary structure											T	T	T	S	S	.							S	S	S	.	.	S		S	S											S	S					T	T								.	.		S	S	S									T	T	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																.										.	.																														.	.															.	.	.	.	.	.	.	.	.
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.		.	180	.	.	.	.	.	.	.			.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.			.	.	.	220	.	.	.	.	.	.	.	.	.	230
		559	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.				.	.	630	.	.	.	.	.
Predicted Secondary structure																																																																							.	.	.
Query SS confidence																																																																							.	.	.
Query Sequence		R	R	P	V	P	V	E	G	S	E	F	V	M	P	A	D	A	V	I	M	A	F	G	F	N	P	H	G	M	P	W	L	E	S	H	G	V	T	V	D	K	W	G	R	I	I	A	D	V	E	S	Q	Y	R	Y	Q	T	T	N	P	K	I	F	A	G	G	D	A	V	.	.	.	R	G	A	D	L	V	V	T
Query Conservation																																																																							.	.	.
Alig confidence		.	.	.	.	.	.																								.											.									.	.	.	.																	.	.	.
Template Conservation		.	.	.	.	.	.																								.											.									.	.	.	.
Template Sequence		.	.	.	.	.	.	G	D	R	K	E	I	L	E	I	D	D	L	I	V	N	Y	G	F	V	S	S	L	G	.	P	I	K	N	W	G	L	D	I	E	.	K	N	S	I	V	V	K	S	.	.	.	.	T	M	E	T	N	I	E	G	F	F	A	A	G	D	I	C	T	Y	E	G	K	V	N	L	I	A	S
Template Known Secondary structure		.	.	.	.	.	.	S	S								S													G	.	G	G	G	G	S						.	T	T						T	.	.	.	.	T	S	B		S	S	T	T					G	G	G				T	T
Template Predicted Secondary structure		.	.	.	.	.	.																								.											.									.	.	.	.
Template SS confidence
								231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.		.	.	.	.	.	.	260	.	.	.		.	.	.	.	.	.	270	.					.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
		636	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	M	A	E	G	R	H	A	A	Q	G	I	I	D	W	L	G	V	K	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	F	G	E	A	P	T	A	V	N	N	A	K	A	Y	M	D	P	K	A
Template Known Secondary structure																			T	T	S
Template Predicted Secondary structure
Template SS confidence
		299	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions