Job Description P37127 Confidence 99.96% Date Thu Jan 5 11:54:48 GMT 2012 Rank 55 Aligned Residues 308 % Identity 18% Template c3l8kB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:dihydrolipoyl dehydrogenase; PDBTitle: crystal structure of a dihydrolipoyl dehydrogenase from2 sulfolobus solfataricus Resolution 2.50 Å

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		329	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																									.	.	.	.	.	.	.	.	.
Query SS confidence																																																																									.	.	.	.	.	.	.	.	.
Query Sequence		R	V	A	I	I	G	A	G	P	A	G	L	A	C	A	D	V	L	T	R	N	G	V	G	V	T	V	Y	D	R	H	P	E	I	G	G	L	L	T	F	G	I	P	S	F	K	L	D	K	S	L	L	A	R	R	R	E	I	F	S	A	M	G	I	H	F	E	L	N	C	E	.	.	.	.	.	.	.	.	.
Query Conservation																																																																									.	.	.	.	.	.	.	.	.
Alig confidence																																																																									.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	V	V	V	I	G	A	G	G	A	G	Y	H	G	A	F	R	L	A	K	A	K	Y	N	V	L	M	A	D	P	K	G	E	L	G	G	N	C	L	Y	S	G	C	V	P	S	K	T	V	R	E	V	I	Q	T	A	W	R	L	T	N	I	A	I	P	L	D	F	S	T	V	Q	D	R	K	D	Y	V	Q	E
Template Known Secondary structure									S													T	T								T	T	S	S	S	S							S
Template Predicted Secondary structure
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
																	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	G	K	D	V	S	L	D	S	L	L	E	Q	Y	D	A	V	F	V	G	V	G	T	Y	R	S	M	K	A	G	L	P	N	E	D	A	P	G	V	Y	D	A	L	P	F	L	I	A	N	T	K	Q	V	M	G	L	E	E	L	P	E	E	P	F	I
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	R	F	K	Q	H	K	R	N	M	S	Q	Y	E	T	L	T	F	Y	K	G	Y	V	K	I	K	D	P	T	H	V	I	V	K	T	D	E	G	K	E	I	E	A	E	T	R	Y	M	I	I	A	S	G	A	E	T	A	K	L	R	L	P	G	V	E	Y	C	L	T	S	D	D	I	F	G	Y	K	T	S	F
Template Known Secondary structure												T	T		T	T						S							T	T							T	T																									T	T	G	G	G		B							S	T	T		S
Template Predicted Secondary structure
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
		465	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.			520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.
Predicted Secondary structure																																																									.	.
Query SS confidence																																																									.	.
Query Sequence		N	T	A	G	L	N	V	V	V	L	G	G	G	D	T	A	M	D	C	V	R	T	A	L	R	H	G	A	S	N	V	T	C	A	Y	R	R	D	E	A	N	M	P	G	S	K	K	E	V	K	N	A	R	E	E	.	.	G	A	N	F	E	F	N	V	Q	P	V	A	L	E	L	N	E	Q	G	H	V	C	G
Query Conservation																																																									.	.
Alig confidence																														.																											.	.
Template Conservation																														.
Template Sequence		R	K	L	P	Q	D	M	V	I	I	G	A	G	Y	I	G	L	E	I	A	S	I	F	R	L	M	G	V	.	Q	T	H	I	I	E	M	L	D	R	A	L	I	T	L	E	D	Q	D	I	V	N	T	L	L	S	I	L	K	L	N	I	K	F	N	S	P	V	T	E	V	K	K	I	K	D	D	E	Y	E	V
Template Known Secondary structure			S			S								S													T	T		.							S	S	S	S	S		T	T	S																				S											T	T
Template Predicted Secondary structure																														.
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.		.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
		543	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	R	F	L	R	T	R	L	G	E	P	D	A	Q	G	R	R	R	P	V	P	V	E	G	S	E	F	V	M	P	A	D	A	V	I	M	A	F	G	F	N	P	H	G	M	P	W	L	E	S	H	G	V	T	V	D	K	W	G	R	I	I	A	D	V	E	S	Q	Y	R	Y	Q	T	T	N	P	K	I	F	A
Query Conservation
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																									.						.	.	.	.
Template Conservation				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																									.						.	.	.	.
Template Sequence		I	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	T	K	D	G	S	K	K	S	I	F	T	N	S	V	V	L	A	A	G	R	R	P	V	I	P	E	G	A	R	E	I	G	L	S	I	S	K	T	G	.	I	V	V	D	E	.	.	.	.	T	M	K	T	N	I	P	N	V	F	A
Template Known Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			S	S	S								S														T	T	T	T	T	T	T			B		S	S	S	.	B				T	.	.	.	.	T		B		S	S	T	T
Template Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																									.						.	.	.	.
Template SS confidence
		246	.																		.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.		.	.	290	.	.					.	.	.	.	.	.	.	300	.	.	.
		623	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	G	D	A	V	R	G	A	D	L	V	V	T	A	M	A	E	G	R	H	A	A	Q	G	I	I	D	W	L	G	V	K	S	V	K	S	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	G	D	A	N	G	L	A	P	Y	Y	H	A	A	V	R	M	S	I	A	A	A	N	N	I	M	A	N	G	M	P	V	D	Y	V	D	V
Template Known Secondary structure			G	G	G	T		S	S		S																	T	T	T								G
Template Predicted Secondary structure
Template SS confidence
		304	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions