Job Description P37127 Confidence 99.97% Date Thu Jan 5 11:54:48 GMT 2012 Rank 23 Aligned Residues 262 % Identity 26% Template c3kd9B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:coenzyme a disulfide reductase; PDBTitle: crystal structure of pyridine nucleotide disulfide oxidoreductase from2 pyrococcus horikoshii Resolution 2.75 Å

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		328	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.			350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.
Predicted Secondary structure																								.	.																																																						.	.	.
Query SS confidence																								.	.																																																						.	.	.
Query Sequence		K	R	V	A	I	I	G	A	G	P	A	G	L	A	C	A	D	V	L	T	R	N	.	.	G	V	G	V	T	V	Y	D	R	H	P	E	I	G	G	L	L	T	F	G	I	P	S	F	K	L	D	K	S	L	L	A	R	R	R	E	I	F	S	A	M	G	I	H	F	E	L	N	C	E	V	G	K	.	.	.
Query Conservation																								.	.																																																						.	.	.
Alig confidence																								.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.
Template Conservation																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	K	V	V	I	I	G	G	G	A	A	G	M	S	A	A	S	R	V	K	R	L	K	P	E	W	D	V	K	V	F	E	A	T	E	W	V	S	E	V	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	K	K	R	G	I	D	L	H	L	N	A	E	V	I	E	V	D	T
Template Known Secondary structure										S															T	T	S							S	S	S						T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					T						T								T
Template Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.																					.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.
							403	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.
Query SS confidence		.	.	.	.	.
Query Sequence		.	.	.	.	.	D	V	S	L	D	S	L	L	E	Q	Y	D	A	V	F	V	G	V	G	T	Y	R	S	M	K	A	G	L	P	N	E	D	A	P	G	V	Y	D	A	L	P	F	L	I	A	N	T	K	Q	V	M	G	L	E	E	L	P	E	E	P	F	I	N	T	A	G	L	N	V	V	V	L	G	G	G
Query Conservation		.	.	.	.	.
Alig confidence		.	.	.	.	.																					.																							.	.	.	.	.	.	.	.	.
Template Conservation																											.																							.	.	.	.	.	.	.	.	.
Template Sequence		G	Y	V	R	V	R	E	N	G	G	E	K	S	Y	E	W	D	Y	L	V	F	A	N	G	A	.	S	P	Q	V	P	A	I	E	G	V	N	L	K	G	V	F	T	A	D	L	P	P	.	.	.	.	.	.	.	.	.	D	A	L	A	I	R	E	Y	M	E	K	Y	K	V	E	N	V	V	I	I	G	G	G
Template Known Secondary structure		T							T	T								S									.							S	B				S	T	T				S		S			.	.	.	.	.	.	.	.	.										T	T	S											S
Template Predicted Secondary structure																											.																							.	.	.	.	.	.	.	.	.
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.		.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.										.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		478	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.					.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.
Predicted Secondary structure																																											.	.	.	.
Query SS confidence																																											.	.	.	.
Query Sequence		D	T	A	M	D	C	V	R	T	A	L	R	H	G	A	S	N	V	T	C	A	Y	R	R	D	E	A	N	M	P	G	S	K	K	E	V	K	N	A	R	E	.	.	.	.	E	G	A	N	F	E	F	N	V	Q	P	V	A	L	E	L	N	E	Q	G	H	V	C	G	I	R	F	L	R	T	R	L	G	E	P
Query Conservation																																											.	.	.	.
Alig confidence																	.																										.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																	.																																																					.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	I	G	I	E	M	A	E	A	F	A	A	Q	G	K	.	N	V	T	M	I	V	R	G	E	R	V	L	R	R	S	F	D	K	E	V	T	D	I	L	E	E	K	L	K	K	H	V	N	L	R	L	Q	E	I	T	M	K	I	E	G	E	E	R	V	E	K	V	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure													T	T	T		.							S	S	S	S	T	T	T	T	T	S													T	T	T	S					S								B	S	S	S	B				.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																	.																																																					.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.		.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
		554	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Predicted Secondary structure																																																																															.	.	.
Query SS confidence																																																																															.	.	.
Query Sequence		D	A	Q	G	R	R	R	P	V	P	V	E	G	S	E	F	V	M	P	A	D	A	V	I	M	A	F	G	F	N	P	H	G	M	P	W	L	E	S	H	G	V	T	V	D	K	W	G	R	I	I	A	D	V	E	S	Q	Y	R	Y	Q	T	T	N	P	K	I	F	A	G	G	D	A	V	R	G	A	.	.	.
Query Conservation																																																																															.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.																								.																				.	.	.	.																				.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.																								.																				.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	V	T	D	A	G	E	Y	K	A	E	L	V	I	L	A	T	G	I	K	P	N	I	E	.	L	A	K	Q	L	G	V	R	I	G	E	T	G	A	I	W	T	N	E	.	.	.	.	K	M	Q	T	S	V	E	N	V	Y	A	A	G	D	V	A	E	T	R	H	V	I
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.			T	T						S						S								.				T	T	T			B		T	T	S	S	B				T	.	.	.	.	T		B		S	S	T	T					G	G	G	B				B	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.																								.																				.	.	.	.
Template SS confidence
													225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.		.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.					.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.
									631	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	D	L	V	V	T	A	M	A	E	G	R	H	A	A	Q	G	I	I
Query Conservation		.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	G	R	R	V	W	V	P	L	A	P	A	G	N	K	M	G	Y	V	A	G	S	N	I	A
Template Known Secondary structure		T		S																						T
Template Predicted Secondary structure
Template SS confidence
		289	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions