Job Description P37127 Confidence 100.00% Date Thu Jan 5 11:54:48 GMT 2012 Rank 12 Aligned Residues 299 % Identity 20% Template c3k30B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:histamine dehydrogenase; PDBTitle: histamine dehydrogenase from nocardiodes simplex Resolution 2.70 Å

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		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.			370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.
Predicted Secondary structure																																																														.	.
Query SS confidence																																																														.	.
Query Sequence		Q	A	L	A	K	G	W	R	P	D	L	S	H	V	T	K	V	D	K	R	V	A	I	I	G	A	G	P	A	G	L	A	C	A	D	V	L	T	R	N	G	V	G	V	T	V	Y	D	R	H	P	E	I	G	G	L	L	T	F	G	.	.	I	P	S	F	K	L	D	K	S	L	L	A	R	R	R	E	I	F
Query Conservation																																																														.	.
Alig confidence																																																														.	.
Template Conservation
Template Sequence		E	E	W	R	R	G	W	H	P	E	R	I	R	A	K	E	S	D	A	R	V	L	V	V	G	A	G	P	S	G	L	E	A	A	R	A	L	G	V	R	G	Y	D	V	V	L	A	E	A	G	R	D	L	G	G	R	V	T	Q	E	S	A	L	P	G	L	S	A	W	G	R	V	K	E	Y	R	E	A	V	L
Template Known Secondary structure		T								S	S						S	S										S														T								S	S	S	S	S		T							T	S	T	T		G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		374	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.
		388	.	390		.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.
Predicted Secondary structure					.
Query SS confidence					.
Query Sequence		S	A	M	.	G	I	H	F	E	L	N	C	E	V	G	K	D	V	S	L	D	S	L	L	E	Q	Y	D	A	V	F	V	G	V	G	T	Y	R	S	M	K	A	G	L	P	N	E	D	A	P	G	V	Y	D	A	L	P	F	L	I	A	N	T	K	Q	V	M	G	L	E	E	L	P	E	E	P	F	I	N	T
Query Conservation					.
Alig confidence					.												.	.	.																				.																						.	.	.	.	.	.	.	.
Template Conservation																	.	.	.																				.																						.	.	.	.	.	.	.	.
Template Sequence		A	E	L	P	N	V	E	I	Y	R	E	S	P	M	T	.	.	.	G	D	D	I	V	E	F	G	F	E	H	V	I	T	A	T	G	A	T	.	W	R	T	D	G	V	A	R	F	H	T	T	A	L	P	I	A	E	G	M	Q	.	.	.	.	.	.	.	.	V	L	G	P	D	D	L	F	A	G	R	L	P
Template Known Secondary structure			T		T	T					S	S					.	.	.							T	T												.			S	S			S	S	S		S	S				B		T	T	S		.	.	.	.	.	.	.	.										T
Template Predicted Secondary structure																	.	.	.																				.																						.	.	.	.	.	.	.	.
Template SS confidence
		454	.	.	.	.	.	460	.	.	.	.	.	.	.	.				.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.		.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.									.	510	.	.	.	.	.	.	.	.	.	520	.
		467	.	.	470	.	.	.	.	.	.			.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.						.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.
Predicted Secondary structure												.	.																												.	.	.	.	.
Query SS confidence												.	.																												.	.	.	.	.
Query Sequence		A	G	L	N	V	V	V	L	G	G	.	.	G	D	T	A	M	D	C	V	R	T	A	L	R	H	G	A	S	N	V	T	C	A	Y	R	R	D	E	.	.	.	.	.	A	N	M	P	G	S	K	K	E	V	K	N	A	R	E	E	G	A	N	F	E	F	N	V	Q	P	V	A	L	E	L	N	E	Q	G	H
Query Conservation												.	.																												.	.	.	.	.
Alig confidence												.	.																	.											.	.	.	.	.																																	.	.	.	.
Template Conservation																														.																																																.	.	.	.
Template Sequence		D	G	K	K	V	V	V	Y	D	D	D	H	Y	Y	L	G	G	V	V	A	E	L	L	A	Q	K	G	Y	.	E	V	S	I	V	T	P	G	A	Q	V	S	S	W	T	N	N	T	F	E	V	N	R	I	Q	R	R	L	I	E	N	G	V	A	R	V	T	D	H	A	V	V	A	V	G	A	G	.	.	.	.
Template Known Secondary structure		S	S	S								S		S	S												T	T		.							S	S	S	S	T	T	G	G	G	G	T	T	T												T	T						S								T	T	.	.	.	.
Template Predicted Secondary structure																														.																																																.	.	.	.
Template SS confidence
		522	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.		550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.
		540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	C	G	I	R	F	L	R	T	R	L	G	E	P	D	A	Q	G	R	R	R	P	V	P	V	E	G	S	E	F	V	M	P	A	D	A	V	I	M	A	F	G	F	N	P	H	G	M	P	W	L	E	S	H	G	V	T	V	D	K	W	G	R	I	I	A	D	V	E	S	Q	Y	R	Y	Q	T	T	N	P	K
Query Conservation
Alig confidence		.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	G	V	T	V	R	D	T	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	S	I	E	R	E	L	E	C	D	A	V	V	M	V	T	A	R	L	P	R	E	E	L	Y	L	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	V	A	R	R	D	A	G	E	I	A	S
Template Known Secondary structure		.	.							T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T									S																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						T	T	T	S		S
Template Predicted Secondary structure		.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
				597	.	.	600	.	.	.	.																.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.																	.	.	.	.	.	.	.	.	640	.	.	.
		620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	F	A	G	G	D	A	V	R	G	A	D	L	V	V	T	A	M	A	E	G	R	H	A	A	Q	G	I	I	D	W	L	G	V	K	S	V	K	S	H
Query Conservation
Alig confidence									.
Template Conservation									.
Template Sequence		V	R	G	I	G	D	A	.	W	A	P	G	T	I	A	A	A	V	W	S	G	R	R	A	A	E	E	F	D	A	V	L	P	S	N	D	E	V	P	F
Template Known Secondary structure						G	G	G	.	T	S																		T	T						T	T	S		S	S
Template Predicted Secondary structure									.
Template SS confidence
		644	.	.	.	.	.	650		.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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