Job Description P37127 Confidence 99.94% Date Thu Jan 5 11:54:48 GMT 2012 Rank 85 Aligned Residues 293 % Identity 18% Template c3f8rD_ PDB info PDB header:oxidoreductase Chain: D: PDB Molecule:thioredoxin reductase (trxb-3); PDBTitle: crystal structure of sulfolobus solfataricus thioredoxin2 reductase b3 in complex with two nadp molecules Resolution 1.95 Å

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		327	.	.			330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.
Predicted Secondary structure					.	.
Query SS confidence					.	.
Query Sequence		D	K	R	.	.	V	A	I	I	G	A	G	P	A	G	L	A	C	A	D	V	L	T	R	N	G	V	G	V	T	V	Y	D	R	H	P	E	I	G	G	L	L	T	F	G	I	P	S	F	K	L	D	K	S	L	L	A	R	R	R	E	I	F	S	A	M	G	I	H	F	E	L	N	C	E	V	G	K	D	V
Query Conservation					.	.
Alig confidence					.	.
Template Conservation
Template Sequence		G	E	K	F	D	V	I	I	V	G	L	G	P	A	A	Y	G	A	A	L	Y	S	A	R	Y	M	L	K	T	L	V	I	G	E	T	P	G	G	Q	L	T	E	A	G	I	V	D	D	Y	L	G	L	I	E	I	Q	A	S	D	M	I	K	V	F	N	K	H	I	E	K	Y	E	V	P	V	L	L	D	I	V
Template Known Secondary structure													S													T	T								S	S	T	T	G	G	G	G	G							S	T	T	S	T	T																T	T	T						S
Template Predicted Secondary structure
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
		405	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	D	S	L	L	E	Q	Y	D	A	V	F	V	G	V	G	T	Y	R	S	M	K	A	G	L	P	N	E	D	A	P	G	V	Y	D	A	L	P	F	L	I	A	N	T	K	Q	V	M	G	L	E	E	L	P	E	E	P	F	I	N	T	A	G	L	N	V	V	V	L	G	G	G	D	T	A	M	D	C	V
Query Conservation
Alig confidence																																.	.
Template Conservation																																.	.
Template Sequence		E	K	I	E	N	R	G	D	E	F	V	V	K	T	K	R	K	G	E	F	K	A	D	S	V	I	L	G	I	G	.	.	V	K	R	R	K	L	G	V	P	G	E	Q	E	F	A	G	R	G	I	S	Y	C	S	V	C	D	A	P	L	F	K	N	R	V	V	A	V	I	G	G	G	D	S	A	L	E	G	A
Template Known Secondary structure								S	S	S						S	S	S														.	.									T	T	T	T	T	T	B	T	T	T			S						G	G	G	G	T	T								S	S
Template Predicted Secondary structure																																.	.
Template SS confidence
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.			.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
		485	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	T	A	L	R	H	G	A	S	N	V	T	C	A	Y	R	R	D	E	A	N	M	P	G	S	K	K	E	V	K	N	A	R	E	E	G	A	N	F	E	F	N	V	Q	P	V	A	L	E	L	N	E	Q	G	H	V	C	G	I	R	F	L	R	T	R	L	G	E	P	D	A	Q	G	R	R	R	P	V	P	V
Query Conservation
Alig confidence									.	.																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation									.	.																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	I	L	S	S	Y	S	.	.	T	K	V	Y	L	I	H	R	R	D	T	F	K	A	Q	P	I	Y	V	E	T	V	K	K	K	P	N	V	E	F	V	L	N	S	V	V	K	E	I	K	G	D	K	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	K
Template Known Secondary structure					T	T	T		.	.	S							S	S	S	S			S										T		T	T						S									S	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure									.	.																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		171	.	.	.	.	.	.			.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.																										.	.
		565	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.				.	.	630	.	.	.	.	.	.	.	.	.	640	.
Predicted Secondary structure																																																																	.	.	.
Query SS confidence																																																																	.	.	.
Query Sequence		E	G	S	E	F	V	M	P	A	D	A	V	I	M	A	F	G	F	N	P	H	G	M	P	W	L	E	S	H	G	V	T	V	D	K	W	G	R	I	I	A	D	V	E	S	Q	Y	R	Y	Q	T	T	N	P	K	I	F	A	G	G	D	A	V	.	.	.	R	G	A	D	L	V	V	T	A	M	A	E	G	R
Query Conservation																																																																	.	.	.
Alig confidence																									.																				.	.	.	.																	.	.	.
Template Conservation																									.																				.	.	.	.
Template Sequence		Q	V	V	V	E	N	L	K	V	N	G	V	F	I	E	I	G	F	D	P	P	T	D	.	F	A	K	S	N	G	I	E	T	D	T	N	G	Y	I	K	V	D	E	.	.	.	.	W	M	R	T	S	V	P	G	V	F	A	A	G	D	C	T	S	A	W	L	G	F	R	Q	V	I	T	A	V	A	Q	G	A
Template Known Secondary structure																									.					T	T			B		T	T	S	S	B				T	.	.	.	.	T		B		S	S	T	T					S	T	T	B	S	T	T	T	T
Template Predicted Secondary structure																									.																				.	.	.	.
Template SS confidence
		224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.		.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.					.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
		642	.	.	.	.	.	.	.	650	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	A	A	Q	G	I	I	D	W	L	G	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	A	A	T	S	A	Y	R	Y	V	T	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		307	.	.	310	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions