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Job DescriptionP37127
Confidence98.98%DateThu Jan 5 11:54:48 GMT 2012
Rank221Aligned Residues190
% Identity22%Templatec3dmeB_
PDB info PDB header:structural genomics, unknown functionChain: B: PDB Molecule:conserved exported protein; PDBTitle: crystal structure of conserved exported protein from2 bordetella pertussis. northeast structural genomics target3 ber141
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   326...330.........340.........350.........360... ......370.... .....380.........390.
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Query Sequence  VDKRVAIIGAGPAGLACADVLTRNGVGVTVYDRHPEIG. . . . . . . . GLLTFGIPSFK. . . . . . LDKSLLARRREIFSAMG
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Template Sequence  TDIDCIVIGAGVVGLAIARALAAGGHEVLVAEAAEGIGTGTSSRNSEVIHAGIYYPADSLKARLCVRGKHLLYEYCAARG
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   3......10.........20.........30.........40.........50.........60.........70.........80..
 
   392.......400.........410.........420.........430.........440.........450.........460.........470.
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Query Sequence  IHFELNCEVGKDVSLDSLLEQYDAVFVGVGTYRSMKAGLPNEDAPGVYDALPFLIANTKQVMGLEELPEEPFINTAGLNV
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Template Sequence  VPHQRLGKLIVATSDAEASQLDSIARRAGANGVDDLQHIDGAAARRLEPALHCTAALVSPSTGIVDSHALM. . . . . . . . .
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   83......90.........100.........110.........120.........130.........140.........150...
 
   472.......480.........490.........500.........510.........520.........530.........540.........550.
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Query Sequence  VVLGGGDTAMDCVRTALRHGASNVTCAYRRDEANMPGSKKEVKNAREEGANFEFNVQPVALELNEQGHVCGIRFLRTRLG
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . LAYQGDAESDGAQLVFHTPLIAGRVRPEGGFELD. . . . . . . .
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   154.....160.........170.........180.......
 
   552.......560.........570.........580.
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Query Sequence  EPDAQGRRRPVPVEGSEFVMPADAVIMAFG
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Template Sequence  . . . . . . . . . . . FGGAEPMTLSCRVLINAAG
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   188.190.........200......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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