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Job DescriptionP37127
Confidence99.95%DateThu Jan 5 11:54:48 GMT 2012
Rank78Aligned Residues291
% Identity19%Templatec3cgdB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:pyridine nucleotide-disulfide oxidoreductase, class i; PDBTitle: pyridine nucleotide complexes with bacillus anthracis coenzyme a-2 disulfide reductase: a structural analysis of dual nad(p)h3 specificity
Resolution2.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   329330.........340.........350 .........360..... ....370.........380.........390.........400.
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Query Sequence  RVAIIGAGPAGLACADVLTRNG. . VGVTVYDRHPEIGGL. . . . . LTFGIPSFKLDKSLLARRREIFSAMGIHFELNCEVG
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Template Sequence  NYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGEIYSYAQCGLPYVISGAIASTEKLIARNVKTFRDKYGIDAKVRHEVT
Template Known Secondary structure 

S
TT

SSS

SB
GGGTTSSS
GGGGBSS
TT

SS
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   2.......10.........20.........30.........40.........50.........60.........70.........80.
 
   402.......410.........420.........430.........440.........450...... ...460.........470.........
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Query Sequence  KDVSLDSLLEQYDAVFVGVGTYRSMKAGLPNEDAPGVYDALPFLIANTKQVMGLE. . ELPEEPFINTAGLNVVVLGGGDT
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Template Sequence  KVDTEKKIVYAEHTKTKDVFEFSYDRLLIATGVRPVMPEWEGRDLQGVHLLKTIPDAERILKTLETNKVEDVTIIGGGAI
Template Known Secondary structure  TTTTTTT


S







BTTTSBT

SSS




S
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   82.......90.........100.........110.........120.........130.........140.........150.........160.
 
   480.........490.........500.........510........ .520.........530.........540.........550.....
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Query Sequence  AMDCVRTALRHGASNVTCAYRRDEANMPGSKKEVKNARE. . . . EGANFEFNVQPVALELNEQGHVCGIRFLRTRLGEPDA
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Template Sequence  GLEMAETFVELGK. KVRMIERNDHIGTIYDGDMAEYIYKEADKHHIEILTNENVKAFKGNERVEAV. . . . . . . . . . . . . .
Template Known Secondary structure  TT
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SSSSSSTTS
TT

S


SSB

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   162.......170.... .....180.........190.........200.........210.........220......
 
   556...560.........570.........580.........590.........600.........610.........620........
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Query Sequence  QGRRRPVPVEGSEFVMPADAVIMAFGFNPHGMPWLESHGVTVDKWGRIIADVESQYRYQTTNPKIFAGGDAVR. . . . . . .
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Template Sequence  . . . . . . . . . ETDKGTYKADLVLVSVGVKPNTD. FLEGTNIRTNHKGAIEVNA. . . . YMQTNVQDVYAAGDCATHYHVIKE
Template Known Secondary structure  .........SS

S


S
G.GGTTS


B
TTS
B


T....TSB
SSTT
GGGB
BTTT
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   227..230.........240......... 250.........260........ .270.........280.........290..
 
   629630.........640........
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Query Sequence  . . . GADLVVTAMAEGRHAAQGII
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Template Sequence  IHDHIPIGTTANKQGRLAGLNML
Template Known Secondary structure  S



T
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   293......300.........310.....
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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