Job Description P37127 Confidence 99.96% Date Thu Jan 5 11:54:48 GMT 2012 Rank 65 Aligned Residues 308 % Identity 20% Template c3ab1B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:ferredoxin--nadp reductase; PDBTitle: crystal structure of ferredoxin nadp+ oxidoreductase Resolution 2.39 Å

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		328	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.											.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.
Predicted Secondary structure																																																		.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																		.	.	.	.	.	.	.	.	.	.
Query Sequence		K	R	V	A	I	I	G	A	G	P	A	G	L	A	C	A	D	V	L	T	R	N	G	V	G	V	T	V	Y	D	R	H	P	E	I	G	G	L	L	T	F	G	I	P	S	F	K	L	.	.	.	.	.	.	.	.	.	.	D	K	S	L	L	A	R	R	R	E	I	F	S	A	M	G	I	H	F	E	L	N
Query Conservation																																																		.	.	.	.	.	.	.	.	.	.
Alig confidence																																																		.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	D	L	T	I	I	G	G	G	P	T	G	I	F	A	A	F	Q	C	G	M	N	N	I	S	C	R	I	I	E	S	M	P	Q	L	G	G	Q	L	A	A	L	Y	P	E	K	H	I	Y	D	V	A	G	F	P	E	V	P	A	I	D	L	V	E	S	L	W	A	Q	A	E	R	Y	N	P	D	V	V	L	N
Template Known Secondary structure										S													T	T								S	S	S	S	S									T	T	S					B	T	T	B	S	S															G	G	G							S
Template Predicted Secondary structure
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
		398	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	E	V	G	K	D	V	S	L	D	S	L	L	E	Q	Y	D	A	V	F	V	G	V	G	T	Y	R	S	M	K	A	G	L	P	N	E	D	A	P	G	V	Y	D	A	L	P	F	L	I	A	N	T	K	Q	V	M	G	L	E	E	L	P	E	E	P	F	I	N	T	A	G	L	N	V	V	V	L	G	G	G
Query Conservation
Alig confidence											.	.
Template Conservation											.	.
Template Sequence		E	T	V	T	K	Y	T	K	L	.	.	D	D	G	T	F	E	T	R	T	N	T	G	N	V	Y	R	S	R	A	V	L	I	A	A	G	L	G	A	F	E	P	R	K	L	P	Q	L	G	N	I	D	H	L	T	G	S	S	V	Y	Y	A	V	K	S	V	E	D	F	K	G	K	R	V	V	I	V	G	G	G
Template Known Secondary structure											.	.	T	T	S							T	T	S													T	T	S								G	G	G				T	T	T	B	T	T	T			S	S		S		G	G	G	G	T	T								S	S
Template Predicted Secondary structure											.	.
Template SS confidence
		95	.	.	.	.	100	.	.	.			.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
		478	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	T	A	M	D	C	V	R	T	A	L	R	H	G	A	S	N	V	T	C	A	Y	R	R	D	E	A	N	M	P	G	S	K	K	E	V	K	N	A	R	E	E	G	A	N	F	E	F	N	V	Q	P	V	A	L	E	L	N	E	Q	G	H	V	C	G	I	R	F	L	R	T	R	L	G	E	P	D	A	Q	G
Query Conservation
Alig confidence																																																																									.	.	.	.	.	.	.	.	.
Template Conservation																																																																									.	.	.	.	.	.	.	.	.
Template Sequence		D	S	A	L	D	W	T	V	G	L	I	K	N	A	A	S	V	T	L	V	H	R	G	H	E	F	Q	G	H	G	K	T	A	H	E	V	E	R	A	R	A	N	G	T	I	D	V	Y	L	E	T	E	V	A	S	I	E	E	S	N	G	V	L	T	R	V	H	L	R	S	S	.	.	.	.	.	.	.	.	.
Template Known Secondary structure											T	T	T	T	S	S							S	S	S	S		S	S		S												T	T	S	S					T										T	T										S	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																									.	.	.	.	.	.	.	.	.
Template SS confidence
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
		558	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.				.	.
Predicted Secondary structure																																																																													.	.	.
Query SS confidence																																																																													.	.	.
Query Sequence		R	R	R	P	V	P	V	E	G	S	E	F	V	M	P	A	D	A	V	I	M	A	F	G	F	N	P	H	G	M	P	W	L	E	S	H	G	V	T	V	D	K	W	G	R	I	I	A	D	V	E	S	Q	Y	R	Y	Q	T	T	N	P	K	I	F	A	G	G	D	A	V	R	G	A	D	L	.	.	.	V	V
Query Conservation																																																																													.	.	.
Alig confidence		.	.	.	.	.	.	.																								.											.									.	.	.	.																						.	.	.
Template Conservation		.	.	.	.	.	.	.																								.											.									.	.	.	.
Template Sequence		.	.	.	.	.	.	.	D	G	S	K	W	T	V	E	A	D	R	L	L	I	L	I	G	F	K	S	N	L	G	.	P	L	A	R	W	D	L	E	L	Y	.	E	N	A	L	V	V	D	S	.	.	.	.	H	M	K	T	S	V	D	G	L	Y	A	A	G	D	I	A	Y	Y	P	G	K	L	K	I	I	Q
Template Known Secondary structure		.	.	.	.	.	.	.	S	S								S						S								.				T	S	S	S				.	T	T						T	.	.	.	.	T	S	B		S	S	T	T					G	G	G				T	T				S
Template Predicted Secondary structure		.	.	.	.	.	.	.																								.											.									.	.	.	.
Template SS confidence
									244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.		.	.	.	270	.	.	.	.	.	.		.	.	.	280	.	.	.	.					.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
		635	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.		.	.	.	.	.	.	.
Predicted Secondary structure																				.
Query SS confidence																				.
Query Sequence		T	A	M	A	E	G	R	H	A	A	Q	G	I	I	D	W	L	G	.	V	K	S	V	K	S	H
Query Conservation																				.
Alig confidence																				.
Template Conservation
Template Sequence		T	G	L	S	E	A	T	M	A	V	R	H	S	L	S	Y	I	K	P	G	E	K	I	R	N	V
Template Known Secondary structure																			S	T	T
Template Predicted Secondary structure
Template SS confidence
		311	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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