Job Description P37127 Confidence 98.70% Date Thu Jan 5 11:54:48 GMT 2012 Rank 275 Aligned Residues 191 % Identity 14% Template c2r4jA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:aerobic glycerol-3-phosphate dehydrogenase; PDBTitle: crystal structure of escherichia coli semet substituted2 glycerol-3-phosphate dehydrogenase in complex with dhap Resolution 1.96 Å

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		329	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.													.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.
Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																				.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	V	A	I	I	G	A	G	P	A	G	L	A	C	A	D	V	L	T	R	N	G	V	G	V	T	V	Y	D	R	H	P	E	I	.	.	.	.	.	.	.	.	.	.	.	.	G	G	L	L	T	F	G	I	P	S	F	K	L	D	K	S	L	L	A	R	R	R	E	I	F	S	A	M	G	I	H	F	E	L
Query Conservation																																				.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																				.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	L	I	V	I	G	G	G	I	N	G	A	G	I	A	A	D	A	A	G	R	G	L	S	V	L	X	L	E	A	Q	D	L	A	C	A	T	S	S	A	S	S	K	L	I	H	G	G	L	R	Y	L	E	H	Y	E	F	R	L	V	S	E	A	L	A	E	R	E	V	L	L	K	X	A	P	H	I	A	F	P
Template Known Secondary structure									S												T	T	T								S	S	S	T	T		S	G	G	G	S	S								G	G	G	G	G	G	T																				T	T	T
Template Predicted Secondary structure
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		397	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	C	E	V	G	K	D	V	S	L	D	S	L	L	E	Q	Y	D	A	V	F	V	G	V	G	T	Y	R	S	M	K	A	G	L	P	N	E	D	A	P	G	V	Y	D	A	L	P	F	L	I	A	N	T	K	Q	V	M	G	L	E	E	L	P	E	E	P	F	I	N	T	A	G	L	N	V	V	V	L	G	G
Query Conservation
Alig confidence																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		X	R	F	R	L	P	H	R	P	H	L	R	P	A	W	M	I	R	I	G	L	F	M	Y	D	H	L	G	K	R	T	S	L	P	G	S	T	G	L	R	F	G	A	N	S	V	L	K	P	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure										T	T	T	S															S	S			S	S	S										T	T	S	S	B		T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
		477	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	D	T	A	M	D	C	V	R	T	A	L	R	H	G	A	S	N	V	T	C	A	Y	R	R	D	E	A	N	M	P	G	S	K	K	E	V	K	N	A	R	E	E	G	A	N	F	E	F	N	V	Q	P	V	A	L	E	L	N	E	Q	G	H	V	C	G	I	R	F	L	R	T	R	L	G	E	P	D	A	Q
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																										.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																										.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	K	R	G	F	E	Y	S	D	C	W	V	D	D	A	R	L	V	L	A	N	A	Q	X	V	V	R	K	G	G	E	V	L	T	R	T	R	A	T	S	A	R	R	E	N	G	L	W	I	V	E	A	E	D	I	D	T	.	.	.	.	.	.	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												T	T						S										T	T									T	T	T	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																										.	.	.	.	.	.	.	.
Template SS confidence
																	135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
		557	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	R	R	R	P	V	P	V	E	G	S	E	F	V	M	P	A	D	A	V	I	M	A	F	G
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	G	K	K	Y	S	W	Q	A	R	G	L	V	N	A	T	G
Template Known Secondary structure		.	.	.	.	.	.	.	.	.																G
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.
Template SS confidence
											192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions