Job Description P37127 Confidence 99.27% Date Thu Jan 5 11:54:48 GMT 2012 Rank 172 Aligned Residues 97 % Identity 24% Template c2hkoA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:lysine-specific histone demethylase 1; PDBTitle: crystal structure of lsd1 Resolution 2.80 Å

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		265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.			.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.
Predicted Secondary structure																																																					.	.
Query SS confidence																																																					.	.
Query Sequence		S	H	Q	T	N	T	L	P	E	I	T	G	R	V	C	P	Q	D	R	L	C	E	G	A	C	T	I	R	D	E	H	G	A	V	T	I	G	N	I	E	R	Y	I	S	D	Q	A	L	A	K	G	.	.	W	R	P	D	L	S	H	V	T	K	V	D	K	R	V	A	I	I	G	A	G	P	A	G	L	A	C
Query Conservation																																																					.	.
Alig confidence																.	.	.	.	.	.																																.	.
Template Conservation																.	.	.	.	.	.
Template Sequence		L	W	L	D	N	P	K	I	Q	L	T	F	E	A	.	.	.	.	.	.	T	L	Q	Q	L	E	A	P	Y	N	S	D	T	V	L	V	H	R	V	H	S	Y	L	E	R	H	G	L	I	N	F	G	I	Y	K	R	I	K	P	L	P	T	K	K	T	G	K	V	I	I	I	G	S	G	V	S	G	L	A	A
Template Known Secondary structure							T	T	B				T	T		.	.	.	.	.	.				T	S		T	T	T	T	T															T	T	S	S	S		S	S		B		S	S				S	S		S									B
Template Predicted Secondary structure																.	.	.	.	.	.
Template SS confidence
		220	.	.	.	.	.	.	.	.	.	230	.	.	.							.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.
		343	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	D	V	L	T	R	N	G	V	G	V	T	V	Y	D	R	H	P	E	I	G	G	L	L	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	R	Q	L	Q	S	F	G	M	D	V	T	L	L	E	A	R	D	R	V	G	G	R	V	A
Template Known Secondary structure								T	T								S	S	S	S	S	B	S	S
Template Predicted Secondary structure
Template SS confidence
		294	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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