Return to main results Retrieve Phyre Job Id

Job DescriptionP37127
Confidence99.97%DateThu Jan 5 11:54:48 GMT 2012
Rank28Aligned Residues283
% Identity18%Templatec2gr2A_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:ferredoxin reductase; PDBTitle: crystal structure of ferredoxin reductase, bpha4 (oxidized form)
Resolution1.85 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   327..330.........340.........350.. .......360.........370.........380.........390.........400....
Predicted Secondary structure 







..


















Query SS confidence 

























. .



















































Query Sequence  DKRVAIIGAGPAGLACADVLTRNGVG. . VTVYDRHPEIGGLLTFGIPSFKLDKSLLARRREIFSAMGIHFELNCEVGKDV
Query Conservation 
















  


 
  ..


 

    

 
  


   
           
   

    
  

 
 
Alig confidence 

























..


















































.
Template Conservation 
  






 


 

  
   
    
 


           
                     

       
  
.
Template Sequence  KAPVVVLGAGLASVSFVAELRQAGYQGLITVVGDEAERPYDRPPLSKDFMAHGDAEKIRLDCKRAPEVEWLLGVTAQSF.
Template Known Secondary structure 
SS

ST

S
SS
S

B
SGGGGT

GGGSB


TTS
S
T

.
Template Predicted Secondary structure 































.
Template SS confidence 















































































   7..10.........20.........30.........40.........50.........60.........70.........80.....
 
   405....410.........420.........430.........440.........450.........460.........470.........480....
Predicted Secondary structure 



















































Query SS confidence 















































































Query Sequence  SLDSLLEQYDAVFVGVGTYRSMKAGLPNEDAPGVYDALPFLIANTKQVMGLEELPEEPFINTAGLNVVVLGGGDTAMDCV
Query Conservation 
   
    


    
      
 
 
    

  
   
                      

 






 

 
 
Alig confidence  ....











































































Template Conservation  ....
                                                             
 


 
    
 
Template Sequence  . . . . DPQAHTVALSDGRTLPYGTLVLATGAAPRALPTLQGATMPVHTLRTLEDARRIQAGLRPQSRLLIVGGGVIGLELA
Template Known Secondary structure  ....TTTTTTS

S





GGGTT
SS


SSTT

TT


S
Template Predicted Secondary structure  ....










































Template SS confidence 















































































   86...90.........100.........110.........120.........130.........140.........150.........160.
 
   485....490.........500.........510... ......520.........530.........540.........550.........
Predicted Secondary structure 













.....
















Query SS confidence 




























. . . . .













































Query Sequence  RTALRHGASNVTCAYRRDEANMPGSKKEV. . . . . KNAREEGANFEFNVQPVALELNEQGHVCGIRFLRTRLGEPDAQGRR
Query Conservation      
 

  



 
       
   
 .....  
  


       
  
     
 
 

          
  
  
Alig confidence 







.



















.....






















.......................
Template Conservation        
 . 
         
               
   

 
     
  
    .......................
Template Sequence  ATARTAGV. HVSLVETQPRLMSRAAPATLADFVARYHAAQGVDLRFERSVTGSVDGV. . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  TT
.SSSSS
TTTS
TT
T

TT.......................
Template Predicted Secondary structure 



.

















.......................
Template SS confidence 















































































   162....... 170.........180.........190.........200.........210.......
 
   560.........570.........580.........590.........600.........610.........620.........630.
Predicted Secondary structure 






































........
Query SS confidence 







































































. . . . . . . .
Query Sequence  RPVPVEGSEFVMPADAVIMAFGFNPHGMPWLESHGVTVDKWGRIIADVESQYRYQTTNPKIFAGGDAVRGAD. . . . . . . .
Query Conservation        
    
 

 

 


  
    
    

     
 
 
         

 




 


  
  ........
Alig confidence  ...
























.









..






....



















........
Template Conservation  ...     
  
  
 

 
 
  
   .      
   ..
 
 

 ....   
    


 

 
            
Template Sequence  . . . VLLDDGTRIAADMVVVGIGVLANDA. LARAAGLACD. . DGIFVDA. . . . YGRTTCPDVYALGDVTRQRNPLSGRFER
Template Known Secondary structure  ...TTS

S
S


.T

BS..SS

T....T
B
SSTT
GGGTTTT
Template Predicted Secondary structure  ...










.






..



....























Template SS confidence 















































































   218.220.........230.........240.. .......250.. ....... 260.........270.........280.......
 
   632.......640........
Predicted Secondary structure  ..
Query SS confidence  . .
















Query Sequence  . . LVVTAMAEGRHAAQGII
Query Conservation  .. 

 

  

 

  
 
Alig confidence  ..
















Template Conservation        
  

  

 

 
Template Sequence  IETWSNAQNQGIAVARHLV
Template Known Secondary structure 


Template Predicted Secondary structure 



Template SS confidence 


















   288.290.........300......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions