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Job DescriptionP37127
Confidence99.06%DateThu Jan 5 11:54:48 GMT 2012
Rank206Aligned Residues170
% Identity29%Templatec1d4cB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:flavocytochrome c fumarate reductase; PDBTitle: crystal structure of the uncomplexed form of the2 flavocytochrome c fumarate reductase of shewanella3 putrefaciens strain mr-1
Resolution2.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  HVTKVDKRVAIIGAGPAGLACADVLTRNGVGVTVYDRHPEIGGLLTF. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  AGVKETTDVVIIGSGGAGLAAAVSARDAGAKVILLEKEPIPGGNTKLAAGGMNAAETKPQAKLGIEDKKQIMIDDTMKGG
Template Known Secondary structure  S



S

ST


SSSS

TTGGG

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Query Sequence  . GIPSFKLDKSLLAR. . . RREIFSAMGIHFELNCEVGKDVSLDSLLEQYDAVFVGVGTYRSMKAGLPNEDAPGVYDALPF
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Template Sequence  RNINDPELVKVLANNSSDSIDWLTSMGADMTDV. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  TT
S
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Query Sequence  LIANTKQVMGLEELPEEPFINTAGLNVVVLGGGDTAMDCVRTALRHGASNVTCAYRRDEANMPGSKKEVKNAREEGANFE
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Template Sequence  . . . . . . . . . . . . . . . GRMGGASVNRSHRPTGGAGVGAHVAQVLWDN. . . . . . . . . . . . . . . . . . . . . . . . . AVKRGTDIR
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TT
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Query Sequence  FNVQPVALELNEQGHVCGIRFLRTRLGEPDAQGRRRPVPVEGSEFVMPADAVIMAFGFNPHGMPWLESHG
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Template Sequence  LNSRVVRILEDASGKVTGVLVKGE. . . . . . . . . . . . . . . . YTGYYVIKADAVVIAAGGFAKNNERVSKYD
Template Known Secondary structure  SS
SSSBT................TT
S




TT

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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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