Job Description P06129 Confidence 2.19% Date Thu Jan 5 10:59:02 GMT 2012 Rank 72 Aligned Residues 132 % Identity 11% Template d2vdfa1 SCOP info Transmembrane beta-barrels OMPT-like Outer membrane adhesin/invasin OpcA Resolution 1.95

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		480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.												.	.	510	.	.	.	.	.	.	.		.	.	520	.	.	.	.	.	.	.	.	.	530	.	.								.	.	.	.	.	.	.	540
Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.											.																.	.	.	.	.	.	.
Query SS confidence																														.	.	.	.	.	.	.	.	.	.	.											.																.	.	.	.	.	.	.
Query Sequence		R	I	K	G	V	E	A	T	A	N	F	D	T	G	P	L	T	H	T	V	S	Y	D	Y	V	D	A	R	.	.	.	.	.	.	.	.	.	.	.	N	A	I	T	D	T	P	L	L	R	.	R	A	K	Q	Q	V	K	Y	Q	L	D	W	Q	L	Y	.	.	.	.	.	.	.	D	F	D	W	G	I	T	Y
Query Conservation																														.	.	.	.	.	.	.	.	.	.	.											.																.	.	.	.	.	.	.
Alig confidence																														.	.	.	.	.	.	.	.	.	.	.											.																.	.	.	.	.	.	.
Template Conservation
Template Sequence		H	I	G	V	R	A	D	I	P	F	D	A	N	Q	G	I	R	L	E	A	G	F	G	R	S	K	K	N	I	I	N	L	E	T	D	E	N	K	L	G	K	T	K	N	V	K	L	P	T	G	V	P	E	N	R	I	D	L	Y	T	G	Y	T	Y	T	Q	T	L	S	D	S	L	N	F	R	V	G	A	G	L
Template Known Secondary structure											S	S	S	S																										T	S	S									S																				T	T
Template Predicted Secondary structure
Template SS confidence
		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
		541	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	Y	L	G	T	R	Y	D	K	D	Y	S	S	Y	P	Y	Q	T	V	K	M	G	G	V	S	L	W	D	L	A	V	A	Y	P	V	T	S	H	L	T	V	R	G	K	I	A	N	L	F	D	K	D	Y	E	T	V	Y	G	Y	Q	T	A	G	R	E	Y	T	L	S	G	S	Y	T
Query Conservation
Alig confidence																																																		.	.
Template Conservation																																																		.	.
Template Sequence		G	F	E	S	S	K	D	S	I	L	H	S	S	R	Q	S	W	L	A	K	V	H	A	D	L	L	S	Q	L	G	N	G	W	Y	I	N	P	W	S	E	V	K	F	D	L	N	S	R	.	.	Y	K	L	N	T	D	I	N	Q	K	T	N	G	W	G	F	G	L	G	A	N	I	G
Template Known Secondary structure																																T	T																	.	.
Template Predicted Secondary structure																																																		.	.
Template SS confidence
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.			.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions