Job Description P06129 Confidence 4.51% Date Thu Jan 5 10:59:02 GMT 2012 Rank 50 Aligned Residues 84 % Identity 12% Template d1iwga6 SCOP info Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Resolution 3.50

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		43	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60			.	.	.	.	.	.	.	.		.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.		.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
Predicted Secondary structure																				.	.									.																															.
Query SS confidence																				.	.									.																															.
Query Sequence		L	A	P	T	T	V	V	T	R	Q	D	I	D	R	W	Q	S	T	.	.	S	V	N	D	V	L	R	R	.	L	P	G	V	D	I	T	Q	N	G	G	S	G	Q	L	S	S	I	F	I	R	G	T	N	A	S	H	V	L	V	.	L	I	D	G	V	R	L	N	L	A	G	V	S	G	S	A	D	L	S	Q
Query Conservation																				.	.									.																															.
Alig confidence																				.	.									.																															.													.	.	.	.	.	.
Template Conservation																																																																										.	.	.	.	.	.
Template Sequence		P	Q	F	K	I	D	I	D	Q	E	K	A	Q	A	L	G	V	S	I	N	D	I	N	T	T	L	G	A	A	W	G	G	S	Y	V	N	D	F	I	D	R	G	R	V	K	K	V	Y	V	M	S	E	A	K	Y	R	M	L	P	D	D	I	G	D	W	Y	V	R	A	A	D	G	.	.	.	.	.	.	Q	M
Template Known Secondary structure																	T															T										T	T											G	G	G	S	S	S	G	G	G	G	T	T						T	T	S	.	.	.	.	.	.
Template Predicted Secondary structure																																																																										.	.	.	.	.	.
Template SS confidence
		725	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.							.	.
		119	120	.	.	.	.	.	.	.	.	.	130	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	P	I	A	L	V	Q	R	V	E	Y	I	R	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	P	F	S	A	F	S	S	S	R	W	E	Y	G
Template Known Secondary structure				G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		799	800	.	.	.	.	.	.	.	.	.	810	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions