Job Description P06129 Confidence 1.63% Date Thu Jan 5 10:59:02 GMT 2012 Rank 90 Aligned Residues 58 % Identity 21% Template c3mydA_ PDB info PDB header:protein transport Chain: A: PDB Molecule:flagellar biosynthesis protein flha; PDBTitle: structure of the cytoplasmic domain of flha from helicobacter pylori Resolution 2.40 Å

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		69	70	.	.	.	.	.	.	.	.	.		80	.	.	.	.	.	.	.	.	.	90																.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
Predicted Secondary structure													.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence													.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	P	G	V	D	I	T	Q	N	G	G	.	S	G	Q	L	S	S	I	F	I	R	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	N	A	S	H	V	L	V	L	I	D	G	V	R	L	N	L	A	G	V	S	G	S	A	D	L	S	Q	F	P	I	A	L	V	Q	R	V	E
Query Conservation													.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.
Template Conservation																																																																		.	.
Template Sequence		M	P	Q	I	R	I	R	D	N	L	Q	L	P	P	T	H	Y	E	I	K	L	K	G	I	V	I	G	E	G	M	V	M	P	D	K	F	L	A	M	N	T	G	F	V	N	R	E	I	E	G	I	P	T	K	E	P	A	F	G	M	D	A	L	W	.	.	I	D	A	K	N	K	E	E	A	I
Template Known Secondary structure											T	T	S		T	T							T	T										T	T	S						S	S			S	S				S						T	T	T							.	.			G	G	G
Template Predicted Secondary structure																																																																		.	.
Template SS confidence
		437	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500			.	.	.	.	.	.	.	.	.	510

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions