Job Description P06129 Confidence 2.03% Date Thu Jan 5 10:59:02 GMT 2012 Rank 77 Aligned Residues 151 % Identity 8% Template c3aehB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:hemoglobin-binding protease hbp autotransporter; PDBTitle: integral membrane domain of autotransporter hbp Resolution 2.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		449	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	N	W	R	I	S	G	Y	R	N	D	V	S	D	L	I	D	Y	D	D	H	T	L	K	Y	Y	N	E	G	K	A	R	I	K	G	V	E	A	T	A	N	F	D	T	G	P	L	T	H	T	V	S	Y	D	Y	V	D	A	R	N	A	I	T	D	T	P	L	L	R	R	A	K	Q	Q	V	K	Y	Q	L	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	D	V	I	A	K	Y	I	H	N	E	N	K	Y	D	L	N	F	A	G	A	G	K	Q	N	F	R	S	H	S	L	Y	A	G	A	E	V	G	Y	R	Y	H	L	T	D	T	T	F	V	E	P	Q	A	E	L	V	W	G	R	L	Q	G	Q	N	S	V	N	P	L	V	G	R	T	G	V	V	S	G	K	T
Template Known Secondary structure																		S	S	T	T																									T	T
Template Predicted Secondary structure
Template SS confidence
		1196	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.	.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260	.	.	.	.	.	.	.	.	.	1270	.	.	.	.	.
		529	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	Q	L	Y	D	F	D	W	G	I	T	Y	Q	Y	L	G	T	R	Y	D	K	D	Y	S	S	Y	P	Y	Q	T	V	K	M	G	G	V	S	L	W	D	L	A	V	A	Y	P	V	T	S	H	L	T	V	R	G	K	I	A	N	L	F	D	K	D	Y	E	T	V	Y	G	Y	Q	T	A	G	R	E	Y	T	L
Query Conservation
Alig confidence																										.	.	.	.	.	.	.	.																																						.	.	.	.	.	.	.
Template Conservation																										.	.	.	.	.	.	.	.																																						.	.	.	.	.	.	.
Template Sequence		F	S	G	K	D	W	S	L	T	A	R	A	G	L	H	Y	E	F	D	L	T	D	S	R	.	.	.	.	.	.	.	.	K	D	S	R	M	L	Y	G	V	G	L	N	A	R	F	G	D	N	T	R	L	G	L	E	V	E	R	S	A	F	G	K	Y	N	T	D	D	.	.	.	.	.	.	.	A	I	N	A
Template Known Secondary structure					S	S																S				.	.	.	.	.	.	.	.																T	T	T												S		S	S					.	.	.	.	.	.	.
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.																																						.	.	.	.	.	.	.
Template SS confidence
		1291	.	.	.	.	.	.	.	.	1300	.	.	.	.	.	.	.	.	.	1310	.	.	.	.									.	.	.	.	.	1320	.	.	.	.	.	.	.	.	.	1330	.	.	.	.	.	.	.	.	.	1340	.	.	.	.	.	.	.	.	.	1350	.								.	.	.	.
		609	610	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	G	S	Y	T	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	I	R	Y	S	F
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		1372	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions