Job Description P06129 Confidence 58.35% Date Thu Jan 5 10:59:02 GMT 2012 Rank 32 Aligned Residues 132 % Identity 9% Template c2f1tB_ PDB info PDB header:membrane protein Chain: B: PDB Molecule:outer membrane protein w; PDBTitle: outer membrane protein ompw Resolution 3.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		481	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.			.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.							.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.
Predicted Secondary structure																									.	.																														.	.	.	.	.	.
Query SS confidence																									.	.																														.	.	.	.	.	.
Query Sequence		I	K	G	V	E	A	T	A	N	F	D	T	G	P	L	T	H	T	V	S	Y	D	Y	.	.	V	D	A	R	N	A	I	T	D	T	P	L	L	R	R	A	K	Q	Q	V	K	Y	Q	L	D	W	Q	L	Y	.	.	.	.	.	.	D	F	D	W	G	I	T	Y	Q	Y	L	G	T	R	Y	D	K	D	Y	S
Query Conservation																									.	.																														.	.	.	.	.	.
Alig confidence																									.	.																														.	.	.	.	.	.
Template Conservation
Template Sequence		T	Q	L	G	L	T	F	T	Y	M	A	T	D	N	I	G	V	E	L	L	A	A	T	P	F	R	H	K	I	G	T	R	A	T	G	D	I	A	T	V	H	H	L	P	P	T	L	M	A	Q	W	Y	F	G	D	A	S	S	K	F	R	P	Y	V	G	A	G	I	N	Y	T	T	F	F	D	N	G	F	N	D
Template Known Secondary structure														T	T									S									T	T	T																				S		T	T		S
Template Predicted Secondary structure
Template SS confidence
		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
		553	.	.	.	.	.	.	560	.	.	.						.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.											.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.
Predicted Secondary structure													.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.
Query SS confidence													.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.
Query Sequence		S	Y	P	Y	Q	T	V	K	M	G	G	.	.	.	.	.	V	S	L	W	D	L	A	V	A	Y	P	V	T	S	H	L	T	V	R	G	K	I	A	.	.	.	.	.	.	.	.	.	.	N	L	F	D	K	D	Y	E	T	V	Y	G	Y	Q	T	A	G	R	E	Y	T	L	S	G	S	Y	T	F
Query Conservation													.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.														.	.
Template Conservation																																																																.	.
Template Sequence		H	G	K	E	A	G	L	S	D	L	S	L	K	D	S	W	G	A	A	G	Q	V	G	V	D	Y	L	I	N	R	D	W	L	V	N	M	S	V	W	Y	M	D	I	D	T	T	A	N	Y	K	L	G	G	A	Q	Q	H	D	S	V	R	L	.	.	D	P	W	V	F	M	F	S	A	G	Y	R	F
Template Known Secondary structure						T	T																							S	S	S																					S	S										.	.
Template Predicted Secondary structure																																																																.	.
Template SS confidence
		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.			.	180	.	.	.	.	.	.	.	.	.	190	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions