 |
Job Description | P20099 | Confidence | 26.74% | Date | Thu Jan 5 11:37:46 GMT 2012 |
Rank | 171 | Aligned Residues | 46 |
% Identity | 20% | Template | d1a62a2 |
SCOP info | OB-fold
| Nucleic acid-binding proteins
| Cold shock DNA-binding domain-like
|
Resolution | 1.55 |
|
  |   |
662 | . | . | . | . | . | . | . | 670 | . | . | . | . | . | . | . | . | . | 680 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
690 | . | . | . | . | . | . | . | . | . | 700 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |
|
|
|
|  |  |  |  |
|  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  | . | . | . | . | . | . |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | A | N | R | E | P | V | T | I | H | P | D | D | A | Q | E | R | G | I | Q | D | G | D | T | V | R | L | W | . |
. |
. |
. |
. |
. |
N | A | R | G | Q | I | L | A | G | A | V | I | S | E | G | I | K | P |
Query Conservation |   |
  |   |   |   |   |   |
|   |
|
|
|   |
|
|   |   |
|
|
|   |
|
|
|   |
|   |
|   | . | . | . | . | . | . |
|   |   |
|   |
|   |   |   |
|   |
|
|   |   |
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |
|
|
|
|
|   |
|   |
|
|
|
|   |
|
|   |
|
|   |
|   |
|   |
|
|   |
|   |   |   |
|
|   |   |
|
|   |   |
|   |   |
|
|
|   |   |
|
Template Sequence |   |
L | A | G | P | D | D | I | Y | V | S | P | S | Q | I | R | R | F | N | L | R | T | G | D | T | I | S | G | K | I | R | P | P | K | E | G | E | R | Y | F | A | L | L | K | V | N | E | V | N | F | D | K | P |
Template Known Secondary structure |   |
|
|
| T | T |
|  |  |  |
|  |  |  |  |  |  | T | T |
|
| T | T |
|  |  |  |  |  |  |  |
|
|
| T | T |
|
| S |  |  |  |  |  |  |  |  |  | T | T | B |
|
|
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
73 | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|