Job Description P20099 Confidence 63.06% Date Thu Jan 5 11:37:46 GMT 2012 Rank 106 Aligned Residues 145 % Identity 17% Template c3fxaA_ PDB info PDB header:sugar binding protein Chain: A: PDB Molecule:sis domain protein; PDBTitle: crystal structure of a putative sugar-phosphate isomerase2 (lmof2365_0531) from listeria monocytogenes str. 4b f2365 at 1.60 a3 resolution Resolution 1.60 Å

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		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.		.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure																							.
Query SS confidence																							.
Query Sequence		D	E	A	L	D	L	I	H	Q	Q	H	K	R	I	R	E	A	Y	G	P	A	.	S	I	F	A	G	S	Y	G	W	R	S	N	G	V	L	H	K	A	S	T	L	L	Q	R	Y	M	A	L	A	G	G	Y	T	G	H	L	G	D	Y	S	T	G	A	A	Q	A	I	M	P	Y	V	V	G	G	S	E	V	Y
Query Conservation																							.
Alig confidence															.	.	.	.	.	.			.								.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.	.	.	.	.	.											.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	E	A	L	V	K	T	V	E	K	I	A	E	.	.	.	.	.	.	C	T	G	K	I	V	V	A	G	C	.	.	.	.	.	G	T	S	G	V	A	A	K	K	L	V	H	S	F	N	C	I	E	R	P	A	V	F	L	T	P	S	D	A	V	H	G	T	L	G	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure															.	.	.	.	.	.		S	S								.	.	.	.	.	T																T	T												T	T	T	G	G	G	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure															.	.	.	.	.	.											.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		30	.	.	.	.	.	.	.	.	.	40	.	.							.	.	.	.	.	.	.	50	.	.						.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	Q	Q	T	S	W	P	L	V	L	E	H	S	D	V	V	V	L	W	S	A	N	P	L	N	T	L	K	I	A	W	N	A	S	D	E	Q	G	L	S	Y	F	S	A	L	R	D	S	G	K	K	L	I	C	I	D	P	M	R	S	E	T	V	D	F	F	G	D	K	M	E	W	V	A	P	H	M	G	T	D
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.																																			.	.
Template Conservation		.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.																																			.	.
Template Sequence		.	.	.	.	.	.	.	.	V	L	Q	K	E	D	I	L	I	L	I	S	.	.	.	.	.	.	.	.	.	.	K	G	G	N	T	G	E	L	L	N	L	I	P	A	C	K	T	K	G	S	T	L	I	G	V	T	E	N	P	D	S	V	I	A	.	.	K	E	A	D	I	F	F	P	V	S	V	S	K	E
Template Known Secondary structure		.	.	.	.	.	.	.	.	G			T	T								.	.	.	.	.	.	.	.	.	.	S	S	S							T	T								T								S		T	T	S				.	.				S								S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.																																			.	.
Template SS confidence
										88	.	90	.	.	.	.	.	.	.	.	.											100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.			.	.	.	.	.	.	140	.	.	.	.	.	.	.
		247																.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	L	M	L	G	I	A	H	T	L	V	E	N	G	W	H	D	E	A	F	L	A	R	C	T	T	G
Query Conservation			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	D	P	F	N	X	L	A	T	A	S	T	X	A	V	I	A	S	F	D	A	V	I	V	C	L	X	T	Y	X	N	Y	T	K	E	Q	F	S	V	I	H	P	G
Template Known Secondary structure			S	T	T	S		S																							T	T
Template Predicted Secondary structure
Template SS confidence
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions