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Job DescriptionP20099
Confidence69.41%DateThu Jan 5 11:37:46 GMT 2012
Rank101Aligned Residues189
% Identity14%Templatec3fj1A_
PDB info PDB header:isomeraseChain: A: PDB Molecule:putative phosphosugar isomerase; PDBTitle: crystal structure of putative phosphosugar isomerase (yp_167080.1)2 from silicibacter pomeroyi dss-3 at 1.75 a resolution
Resolution1.75 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   83......90.........100... ......110.........120.........130.........140.........150.........
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Query Sequence  VRVSWDEALDLIHQQHKRIRE. . . AYGPASIFAGSYGWRSNGVLHKASTLLQRYMALAGGYTGHLGDYSTGAAQAIMPYV
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Template Sequence  IPEAVQRLLDHGAQDVARVAAVLRLRDPSFVATVARG. . . . SSDHVCTYLSYAAELLLGLPVASLGPSVASVYDAR. . . .
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   15....20.........30.........40.........50. ........60.........70.........80......
 
   160.........170.........180.........190.........200.........210.........220. ........230........
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Query Sequence  VGGSEVYQQQTSWPLVLEHSDVVVLWSANPLNTLKIAWNASDEQGLSYFSALRDSGKKLICI. DPMRSETVDFFGDKMEW
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Template Sequence  . . . . . . . . . . . . . . . LRLDRALCLAVS. . . . . . . . . . QSGKSPDIVAXTRNAGRDGALCVALTNDAASPLAGV. . . SAHT
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   87..90........ .100.........110.........120.........130.... ....
 
   239240...... ...250.........260.........270.........280.........290.........300.........310
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Query Sequence  VAPHMGTD. . . . . . . . VALMLGIAHTLVENGWHDEAFLARCTTGYAVFASYLLGESDGIAKTAEWAAEICGVGAAKIREL
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Template Sequence  IDIHAGPELSVAATKTFVTSAVAGLXLLADWAEDDGLRAALGNLPETLAAASRID. . . . . . . . . . . . . . . . . . . . . WPEX
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   139140.........150.........160.........170.........180.........190... ....
 
   311........320........
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Query Sequence  AAIFHQNTTMLMAGWGMQ
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Template Sequence  RVAIGARPSLFTLGRGTS
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   198.200.........210.....
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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