Job Description P20099 Confidence 84.14% Date Thu Jan 5 11:37:46 GMT 2012 Rank 83 Aligned Residues 117 % Identity 11% Template c2vbgB_ PDB info PDB header:lyase Chain: B: PDB Molecule:branched-chain alpha-ketoacid decarboxylase; PDBTitle: the complex structure of the branched-chain keto acid2 decarboxylase (kdca) from lactococcus lactis with 2r-1-3 hydroxyethyl-deazathdp Resolution 1.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	E	A	L	D	L	I	H	Q	Q	H	K	R	I	R	E	A	Y	G	P	A	S	I	F	A	G	S	Y	G	W	R	S	N	G	V	L	H	K	A	S	T	L	L	Q	R	Y	M	A	L	A	G	G	Y	T	G	H	L	G	D	Y	S	T	G	A	A	Q	A	I	M	P	Y	V	V	G	G	S	E	V	Y	Q
Query Conservation
Alig confidence															.	.	.	.	.	.												.	.	.																										.
Template Conservation															.	.	.	.	.	.												.	.	.																										.
Template Sequence		Q	V	I	L	S	K	I	E	E	S	L	K	N	.	.	.	.	.	.	A	Q	K	P	V	V	I	A	G	H	E	.	.	.	V	I	S	F	G	L	E	K	T	V	T	Q	F	V	S	E	T	K	L	P	I	T	T	L	N	.	F	G	K	S	A	V	D	E	S	L	P	S	F	L	G	I	Y	N	G	K	L
Template Known Secondary structure															.	.	.	.	.	.		S	S									.	.	.				T	T													T							S	.	T	T	T	T	S	S		T	T	S	T	T							G	G	G
Template Predicted Secondary structure															.	.	.	.	.	.												.	.	.																										.
Template SS confidence
		192	.	.	.	.	.	.	.	200	.	.	.	.							.	.	.	.	.	210	.	.	.	.	.				.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240		.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	Q	T	S	W	P	L	V	L	E	H	S	D	V	V	V	L	W	S	A	N	P	L	N	T	L	K	I	A	W	N	A	S	D	E	Q	G	L	S	Y	F	S	A	L	R	D	S	G	K	K	L	I	C	I	D	P	M	R	S
Query Conservation
Alig confidence																																						.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																						.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	E	I	S	L	K	N	F	V	E	S	A	D	F	I	L	M	L	G	V	K	L	T	D	S	S	T	G	A	F	T	H	H	L	D	E	.	.	.	.	.	.	.	.	.	.	.	.	N	K	M	I	S	L	N	I	D	E	G
Template Known Secondary structure		S												S						S					G	G	G	T	T	T	T						G	.	.	.	.	.	.	.	.	.	.	.	.	G	G						S	S
Template Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		262	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.													.	.	300	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions