Return to main results Retrieve Phyre Job Id

Job DescriptionP20099
Confidence100.00%DateThu Jan 5 11:37:46 GMT 2012
Rank10Aligned Residues704
% Identity18%Templatec2ivfA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:ethylbenzene dehydrogenase alpha-subunit; PDBTitle: ethylbenzene dehydrogenase from aromatoleum aromaticum
Resolution1.88 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30... ......40 .........50.........60.........70..
Predicted Secondary structure 












....






.......














Query SS confidence 





























. . . .






. . . . . . .































Query Sequence  SSSRYSVLTAAHWGPMLVETDGETVFSSRG. . . . ALATGME. . . . . . . NSLQSAVRDQVHSNTRVRFPMVRKGFLASPEN
Query Conservation          
   

          
     ....
   
  .......
 

       
 



  

 
         
Alig confidence 













.














....






.......























........
Template Conservation   
  
 
 
   
 .  
 



 
    
    
   
  
    
 
 

 
     
 
 

  



 ........
Template Sequence  GSHLNICWPQGSCK. FYVYVRNGIVWREEQAAQTPACNVDYVDYNPLGCQKGSAFNNNLYGDERVKYPLKRV. . . . . . . .
Template Known Secondary structure 


S

SS




.TT





SSTTS



S


TTGGGTTSTTB

S

........
Template Predicted Secondary structure 












.



























........
Template SS confidence 















































































   80.........90... ......100.........110.........120.........130.........140.........150
 
   73......80.........90.........100.........110.........120.........130.........140.........150..
Predicted Secondary structure 




























Query SS confidence 















































































Query Sequence  PQGIRGQDEFVRVSWDEALDLIHQQHKRIREAYGPASIFAGSYGWRSNGVLHKASTLLQRYMALAGGYTGHLGDYSTGAA
Query Conservation    
 

 
    






  

 

  
    
  

                      
    
              
Alig confidence  ..





















































...














.




Template Conservation  ..
 

 
    







 

 

       

  
                  ...

    
        .     
Template Sequence  . . GKRGEGKWKRVSWDEAAGDIADSIIDSFEAQGSDGFILDAPHVHAGSIAWGAGF. . . RMTYLMDGVSPDINV. DIGDT
Template Known Secondary structure  ..SSTTS



GGGG



STT
...T
B
.T

Template Predicted Secondary structure  ..
















...









.


Template SS confidence 















































































   151........160.........170.........180.........190.........200.... .....210......... 220....
 
   153......160.........170.........180.........190.........200.........210.........220.........230..
Predicted Secondary structure 






























Query SS confidence 















































































Query Sequence  QAIMPYVVGGSEVYQQQTSWPLVLEHSDVVVLWSANPLNTLKIAWNASDEQGLSYFSALRDSGKKLICIDPMRSETVDFF
Query Conservation          
             
   

 

  
 

  
                  
   
 







 
 

   
Alig confidence 









....





























........
























...
Template Conservation          
 ....        
  

  

  
 
   
    ........      

  









 
 

...
Template Sequence  YMGAFHTFGK. . . . MHMGYSADNLLDAELIFMTCSNWSYTYPSS. . . . . . . . YHFLSEARYKGAEVVVIAPDFNPTT. . .
Template Known Secondary structure 
S
....


B

GGGGGG
SS


TTT........T

SS

TTG...
Template Predicted Secondary structure 

....













........






...
Template SS confidence 















































































   225....230.... .....240.........250.........260.... .....270.........280.........
 
   233......240.........250.........260.........270..
Predicted Secondary structure 














........................................
Query SS confidence 







































. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Sequence  GDKMEWVAPHMGTDVALMLGIAHTLVENGWHDEAFLARCT. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Conservation 
 

 

 





 

 


   

     
  

   
........................................
Alig confidence 







































........................................
Template Conservation    

 








 





  


 
   
  

   

 
 

  
 
  


 
            
         
Template Sequence  PAADLHVPVRVGSDAAFWLGLSQVMIDEKLFDRQFVCEQTDLPLLVRMDTGKFLSAEDVDGGEAKQFYFFDEKAGSVRKA
Template Known Secondary structure  GG
S


TT
TT
S
BSTTSTTT
SB
BS

TT
TTTT
Template Predicted Secondary structure 














































Template SS confidence 















































































   290.........300.........310.........320.........330.........340.........350.........360.........
 
   273......280.........290.........300.........310.........320..
Predicted Secondary structure  ..............................
















Query SS confidence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .

















































Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . TGYAVFASYLLGESDGIAKTAEWAAEICGVGAAKIRELAAIFHQNTTMLM
Query Conservation  .............................. 

      
         


 

 



    
  

   
     
 
Alig confidence  ..............................










......
































Template Conservation              
 
     
  
    
 
 
  
     ...... 



 

 



  
 
  

   
       
Template Sequence  SRGTLKLDFMPALEGTFSARLKNGKTIQVRTVFEGLREHLK. . . . . . DYTPEKASAKCGVPVSLIRELGRKVAKKRTCSY
Template Known Secondary structure 
SS



SS



S

TTS
GG......GGS


S
Template Predicted Secondary structure 






























......









Template SS confidence 















































































   370.........380.........390.........400.........410 .........420.........430.........440...
 
   323......330.........340.........350.........360.........370.........380....
Predicted Secondary structure 










































..................
Query SS confidence 





























































. . . . . . . . . . . . . . . . . .
Query Sequence  AGWGMQRQQFGEQKHWMIVTLAAMLGQIGTPGGGFGLSYHFANGGNPTRRSAVLSSMQGSLP. . . . . . . . . . . . . . . . . .
Query Conservation   
 
      
     
   
  
 
  
  

                             ..................
Alig confidence 





























































..................
Template Conservation   
 
      
    


  
  
 
  
  


                                              
Template Sequence  IGFSSAKSYHGDLMERSLFLAMALSGNWGKPGTGAFAWAYSDDNMVYLGVMSKPTAQGGMDELHQMAEGFNKRTLEADPT
Template Known Secondary structure 
TTTTTBTTTT
SSSTT

S
B





SS
GGGTTT
TT
Template Predicted Secondary structure 



























































Template SS confidence 















































































   444.....450.........460.........470.........480.........490.........500.........510.........520...
 
   385....390.........400.........410.........420....
Predicted Secondary structure  ........................................





















Query SS confidence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .







































Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . GGCDAVDKIPVARIVEALENPGGAYQHNGMNRHFPDIRFI
Query Conservation  ........................................         
                          

 
Alig confidence  ........................................







































Template Conservation                                                               
              

  
Template Sequence  STDEMGNIEFMKVVTSAVGLVPPAMWLYYHVGYDQLWNNKAWTDPALKKSFGAYLDEAKEKGWWTNDHIRPAPDKTPQVY
Template Known Secondary structure 

TT
SSTT
GGGS
TTSSS
TTSS
TTTS
S
TTS


Template Predicted Secondary structure 



















































Template SS confidence 















































































   524.....530.........540.........550.........560.........570.........580.........590.........600...
 
   425....430.........440. ........450.........460.........470.........480.........490.........500..
Predicted Secondary structure 





..





































Query SS confidence 
















. .




























































Query Sequence  WWAGGANFTHHQDTNRL. . IRAWQKPELVVISECFWTAAAKHADIVLPATTSFERNDLTMTGDYSNQHLVPMKQVVPPRY
Query Conservation       

    
     .. 


 


  
  
   



  





     
                     
 
  
Alig confidence 
















..











































.















Template Conservation       

  
            
 


 

  
   
 

  






 
  
  
      .    
      
 
 
Template Sequence  MLLSQNPMRRKRSGAKMFPDVLFPKLKMIFALETRMSSSAMYADIVLPCAWYYEKHEMTTPCS. GNPFFTFVDRSVAPPG
Template Known Secondary structure  S

STTTTGGG
SSB

TTGGG
SB

TT



S.SS

S

ST
Template Predicted Secondary structure 































.










Template SS confidence 















































































   604.....610.........620.........630.........640.........650.........660...... ...670.........680..
 
   503......510.........520.. .......530.........540.........550........
Predicted Secondary structure 







........................


















Query SS confidence 



















. . . . . . . . . . . . . . . . . . . . . . . .



































Query Sequence  EARNDFDVFAELSERWEKGG. . . . . . . . . . . . . . . . . . . . . . . . YARFTEGKSELQWLETFYNVARQRGASQQVELPPFA
Query Conservation 
 
 
  
   

 


   ........................                                    
Alig confidence 



















........................


























..






Template Conservation 


 
  
   





                                                      ..      
Template Sequence  ECREEWDAIALILKKVGERAAARGLTEFNDHNGRKRRYDELYKKFTMDGHLLTNEDCLKEMVDINRAVGVF. . AKDYTYE
Template Known Secondary structure  T
B
TT


TTS
GGGTTTTT

STTSS..
TT

Template Predicted Secondary structure 



























..




Template SS confidence 















































































   683......690.........700.........710.........720.........730.........740.........750... ......760
 
   559560.........570.........580....... ..590.........600... ......610.........620......
Predicted Secondary structure 
















..........












..

















Query SS confidence 




























. . . . . . . . . .















. .






















Query Sequence  EFWQANQLIEMPENPDSERFIRFADFCRD. . . . . . . . . . PLAHPLKTASGKIEIF. . SQRIADYGYPDCPGHPMWLEPDE
Query Conservation 
                            ..........       
 


 
  ..   
           
    
  
Alig confidence 




























..........















..








....









Template Conservation                                                
 


   
          
.... 

       
Template Sequence  KFKKEGQTRFLSMGTGVSRYAHANEVDVTKPIYPMRWHFDDKKVFPTHTRRAQFYLDHDWYLEAGE. . . . SLPTHKDTPM
Template Known Secondary structure 


S
TTST
S


TTS


S
S



SSTTSSB





T
....SS







Template Predicted Secondary structure 




















































....









Template SS confidence 















































































   761........770.........780.........790.........800.........810.........820...... ...830......
 
   627..630.........640.........650.........660.........670.........680.........690.........700......
Predicted Secondary structure 








































Query SS confidence 















































































Query Sequence  WQGNAEPEQLQVLSAHPAHRLHSQLNYSSLRELYAVANREPVTIHPDDAQERGIQDGDTVRLWNARGQILAGAVISEGIK
Query Conservation         


 
 
       

      
  
        
 


 

  


 


 
 
 
  
 
   
 

  
 
Alig confidence  ...
























.


















































Template Conservation  ...    


 
 
       

    
.   
        
 


 

   

 


 
 
 
  
 
   
 

  
 
Template Sequence  . . . VGGDHPFKITGGHPRVSIHSTHLTN. SHLSRLHRGQPVVHMNSKDAAELGIKDGDMAKLFNDFADCEIMVRTAPNVQ
Template Known Secondary structure  ...TTSS
S



SSSSTTTTTT
.TTS
SS
TT

TT

SS
TTS
Template Predicted Secondary structure  ...

















.

















Template SS confidence 















































































   837..840.........850.........860. ........870.........880.........890.........900.........910..
 
   707..710.........720.........730.........740... ...... 750.........760.
Predicted Secondary structure 



























.





...............




Query SS confidence 




































.





. . . . . . . . . . . . . . .











Query Sequence  PGVICIHEGAWPDLDLTADGICKNGAVNVLTKDLPSS. RLGNGC. . . . . . . . . . . . . . . AGNTALAWLEKY
Query Conservation 

 
    
              
   
 
       .      ...............      
 


 
Alig confidence 













.......















.





...............











Template Conservation 

 
          .......      
 

     
    


           
     

  
 
 

Template Sequence  PKQCIVYFWDAHQY. . . . . . . KGWKPYDILLIGMPKPLHLAGGYEQFRYYFMNGSPAPVTDRGVRVSIKKA
Template Known Secondary structure  TT




GGGS.......GGG

GGGG





GGGG

SBTTB

BTTB
S

S


BT
Template Predicted Secondary structure 








.......




































Template SS confidence 






































































   913......920...... ...930.........940.........950.........960.........970......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions