Job Description P20099 Confidence 100.00% Date Thu Jan 5 11:37:46 GMT 2012 Rank 14 Aligned Residues 676 % Identity 19% Template c2iv2X_ PDB info PDB header:oxidoreductase Chain: X: PDB Molecule:formate dehydrogenase h; PDBTitle: reinterpretation of reduced form of formate dehydrogenase h2 from e. coli Resolution 2.27 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.				.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.					.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																													.	.	.																							.	.	.	.
Query SS confidence																													.	.	.																							.	.	.	.
Query Sequence		R	Y	S	V	L	T	A	A	H	W	G	P	M	L	V	E	T	D	G	E	T	V	F	S	S	R	G	.	.	.	A	L	A	T	G	M	E	N	S	L	Q	S	A	V	R	D	Q	V	H	S	N	T	.	.	.	.	R	V	R	F	P	M	V	R	K	G	F	L	A	S	P	E	N	P	Q	G	I	R	G	Q
Query Conservation																													.	.	.																							.	.	.	.
Alig confidence													.																.	.	.																							.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation													.																																																						.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	V	C	P	Y	C	A	S	G	C	K	.	I	N	L	V	V	D	N	G	K	I	V	R	A	E	A	A	Q	G	K	T	N	Q	G	T	L	C	L	K	G	Y	Y	G	W	D	F	I	N	D	T	Q	I	L	T	P	R	L	K	T	P	M	I	R	R	.	.	.	.	.	.	.	.	.	.	.	.	Q	R	G
Template Known Secondary structure					S	S	B	T	T				.							T	T											T	T	T	T	T									T	T	G	G	G	G				S	S	S		B			S						.	.	.	.	.	.	.	.	.	.	.	.	S	T	T
Template Predicted Secondary structure													.																																																						.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.		.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.													70	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.		.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																	.
Query SS confidence																																																																	.
Query Sequence		D	E	F	V	R	V	S	W	D	E	A	L	D	L	I	H	Q	Q	H	K	R	I	R	E	A	Y	G	P	A	S	I	F	A	G	S	Y	G	W	R	S	N	G	V	L	H	K	A	S	T	L	L	Q	R	Y	M	A	L	A	G	G	Y	T	G	.	H	L	G	D	Y	S	T	G	A	A	Q	A	I	M	P	Y
Query Conservation																																																																	.
Alig confidence																																											.	.	.																				.
Template Conservation																																											.	.	.
Template Sequence		G	K	L	E	P	V	S	W	D	E	A	L	N	Y	V	A	E	R	L	S	A	I	K	E	K	Y	G	P	D	A	I	Q	T	T	G	S	S	R	G	T	G	.	.	.	N	E	T	N	Y	V	M	Q	K	F	A	R	A	V	I	G	T	N	N	V	D	C	C	A	R	V	H	G	P	S	V	A	G	L	H	Q
Template Known Secondary structure		S																											G	G	G							S	S	T	T		.	.	.														T	T								S	S					S	S	S		S
Template Predicted Secondary structure																																											.	.	.
Template SS confidence
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.				.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	V	G	G	S	E	V	Y	Q	Q	Q	T	S	W	P	L	V	L	E	H	S	D	V	V	V	L	W	S	A	N	P	L	N	T	L	K	I	A	W	N	A	S	D	E	Q	G	L	S	Y	F	S	A	L	R	D	S	G	K	K	L	I	C	I	D	P	M	R	S	E	T	V	D	F	F	G	D	K	M	E	W
Query Conservation
Alig confidence						.	.	.	.																															.	.	.	.	.	.	.	.																										.	.	.
Template Conservation						.	.	.	.																															.	.	.	.	.	.	.	.																										.	.	.
Template Sequence		S	V	G	N	.	.	.	.	G	A	M	S	N	A	I	N	E	I	D	N	T	D	L	V	F	V	F	G	Y	N	P	A	D	S	H	P	I	V	.	.	.	.	.	.	.	.	A	N	H	V	I	N	A	K	R	N	G	A	K	I	I	V	C	D	P	R	K	I	E	T	A	.	.	.	R	I	A	D	M	H
Template Known Secondary structure				S		.	.	.	.		S		S	S		G	G	G	G	G	G		S						S											.	.	.	.	.	.	.	.										T	T								S	S						.	.	.		T		S
Template Predicted Secondary structure						.	.	.	.																															.	.	.	.	.	.	.	.																										.	.	.
Template SS confidence
		151	.	.	.					.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.									.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.				210	.	.	.	.	.
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		V	A	P	H	M	G	T	D	V	A	L	M	L	G	I	A	H	T	L	V	E	N	G	W	H	D	E	A	F	L	A	R	C	T	T	G	Y	A	V	F	A	S	Y	L	L	G	E	S	D	G	I	A	K	T	A	E	W	A	A	E	I	C	G	V	G	A	A	K	I	R	E	L	A	A	I	F	H	Q	N	.
Query Conservation																																																																																	.
Alig confidence																																																.	.	.	.	.	.																												.
Template Conservation																																																.	.	.	.	.	.
Template Sequence		I	A	L	K	N	G	S	N	I	A	L	L	N	A	M	G	H	V	I	I	E	E	N	L	Y	D	K	A	F	V	A	S	R	T	E	G	F	E	E	Y	R	K	I	V	E	G	.	.	.	.	.	.	Y	T	P	E	S	V	E	D	I	T	G	V	S	A	S	E	I	R	Q	A	A	R	M	Y	A	Q	A	K
Template Known Secondary structure						T	T																T	T		S																					T	.	.	.	.	.	.			S	G	G	G																					S	S
Template Predicted Secondary structure																																																.	.	.	.	.	.
Template SS confidence
		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.							.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.
		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.			.	.	.	.	.	.	.	.	390	.	.	.	.	.
Predicted Secondary structure																																																																		.	.
Query SS confidence																																																																		.	.
Query Sequence		T	T	M	L	M	A	G	W	G	M	Q	R	Q	Q	F	G	E	Q	K	H	W	M	I	V	T	L	A	A	M	L	G	Q	I	G	T	P	G	G	G	F	G	L	S	Y	H	F	A	N	G	G	N	P	T	R	R	S	A	V	L	S	S	M	Q	G	.	.	S	L	P	G	G	C	D	A	V	D	K	I	P	V
Query Conservation																																																																		.	.
Alig confidence																																																																		.	.
Template Conservation
Template Sequence		S	A	A	I	L	W	G	M	G	V	T	Q	F	Y	Q	G	V	E	T	V	R	S	L	T	S	L	A	M	L	T	G	N	L	G	K	P	H	A	G	V	N	P	V	R	G	Q	N	N	V	Q	G	A	C	D	M	G	A	L	P	D	T	Y	P	G	Y	Q	Y	V	K	D	P	A	N	R	E	K	F	A	K	A
Template Known Secondary structure		S							T	T	G	G	G	S	S	S															T	T		S	S	S	T	T		S						S	B	T	T							T	T		B	T	T			G	G	G			T	T
Template Predicted Secondary structure
Template SS confidence
		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.
		396	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	R	I	V	E	A	L	E	N	P	G	G	A	Y	Q	H	N	G	M	N	R	H	F	P	D	I	R	F	I	W	W	A	G	G	A	N	F	T	H	H	Q	D	T	N	R	L	I	R	A	W	Q	K	P	E	L	V	V	I	S	E	C	F	W	T	A	A	A	K	H	A	D	I	V	L	P	A	T	T	S	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		W	G	V	E	S	L	P	A	H	T	G	Y	R	I	S	E	L	P	H	R	A	A	H	G	E	V	R	A	A	Y	I	M	G	E	D	P	L	Q	T	D	A	E	L	S	A	V	R	K	A	F	E	D	L	E	L	V	I	V	Q	D	I	F	M	T	K	T	A	S	A	A	D	V	I	L	P	S	T	S	W	G
Template Known Secondary structure		T	T		S					S					G	G	G							T	T	S								S							S	S	S											S	S							S	B							T		S					B			B	T
Template Predicted Secondary structure
Template SS confidence
		370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.
		476	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	R	N	D	L	T	M	T	G	D	Y	S	N	Q	H	L	V	P	M	K	Q	V	V	P	P	R	Y	E	A	R	N	D	F	D	V	F	A	E	L	S	E	R	W	E	K	G	G	Y	A	R	F	T	E	G	K	S	E	L	Q	W	L	E	T	F	Y	N	V	A	R	Q	R	G	A	S	Q	Q	V	E	L	P
Query Conservation
Alig confidence										.	.	.																																						.	.														.	.	.	.	.	.	.	.	.
Template Conservation										.	.	.																																						.	.														.	.	.	.	.	.	.	.	.
Template Sequence		E	H	E	G	V	F	T	A	.	.	.	A	D	R	G	F	Q	R	F	F	K	A	V	E	P	K	W	D	L	K	T	D	W	Q	I	I	S	E	I	A	T	R	M	G	Y	P	M	H	.	.	Y	N	N	T	Q	E	I	W	D	E	L	R	H	.	.	.	.	.	.	.	.	.	L	C	P	D	F	Y	G	A
Template Known Secondary structure		T	B							.	.	.	T	T	S									S			S	S	S		B													T	T					.	.		S	S											.	.	.	.	.	.	.	.	.			T	T	T	T	T
Template Predicted Secondary structure										.	.	.																																						.	.														.	.	.	.	.	.	.	.	.
Template SS confidence
		450	.	.	.	.	.	.	.				.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.			.	.	.	.	.	500	.	.	.	.	.	.	.										.	.	510	.	.	.	.	.
		556	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	F	A	E	F	W	Q	A	N	Q	L	I	E	M	P	E	N	P	D	S	E	R	F	I	R	F	A	D	F	C	R	D	P	L	A	H	P	L	K	T	A	S	G	K	I	E	I	F	S	Q	R	I	A	D	Y	G	Y	P	D	C	P	G	H	P	M	W	L	E	P	D	E	W	Q	G	N	A	E	P	E	Q
Query Conservation
Alig confidence																							.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.
Template Conservation																							.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.
Template Sequence		T	Y	E	K	M	G	E	L	G	F	I	Q	W	P	C	R	D	T	S	D	A	.	.	.	.	.	D	Q	G	T	S	Y	L	F	K	E	K	F	D	T	P	N	G	L	A	Q	F	F	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	C	D	W	V	A	P	I	D	K	L	.	.	T	D	E	Y	P
Template Known Secondary structure							T	T	T					S					S	S	T	T	.	.	.	.	.			B		S	S	S		S	S			S	S	T	T	S							.	.	.	.	.	.	.	.	.	.	.	.	.	.							S	S			.	.		S	S	S
Template Predicted Secondary structure																							.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.
Template SS confidence
		516	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.						.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.															560	.	.	.	.	.	.	.	.	.			570	.	.	.	.
		636	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.		.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.
Predicted Secondary structure																																.
Query SS confidence																																.
Query Sequence		L	Q	V	L	S	A	H	P	A	H	R	L	H	S	Q	L	N	Y	S	S	L	R	E	L	Y	A	V	A	N	R	.	E	P	V	T	I	H	P	D	D	A	Q	E	R	G	I	Q	D	G	D	T	V	R	L	W	N	A	R	G	Q	I	L	A	G	A	V	I	S	E	G	I	K	P	G	V	I	C	I	H	E
Query Conservation																																.
Alig confidence																																.
Template Conservation
Template Sequence		M	V	L	S	T	V	R	E	V	G	H	Y	S	C	R	S	M	T	G	N	C	A	A	L	A	A	L	A	D	E	P	G	Y	A	Q	I	N	T	E	D	A	K	R	L	G	I	E	D	E	A	L	V	W	V	H	S	R	K	G	K	I	I	T	R	A	Q	V	S	D	R	P	N	K	G	A	I	Y	M	T	Y
Template Known Secondary structure										T	T			S	S		T	T	G	G	G	S					T	T			S	S														T			T	T								S	S											S	S	S		T	T
Template Predicted Secondary structure
Template SS confidence
		575	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.
		715	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	A	W	P	D	L	D	L	T	A	D	G	I	C	K	N	G	A	V	N	V	L	T	K	D	L	P	S	S	R	L	G	N	G	C	A	G	N	T	A	L	A	W	L	E	K	Y
Query Conservation
Alig confidence														.	.	.	.	.	.													.
Template Conservation														.	.	.	.	.	.													.
Template Sequence		Q	W	W	P	E	Y	K	Y	C	A	V	R	.	.	.	.	.	.	V	E	P	I	A	D	Q	R	A	A	E	Q	.	Y	V	I	D	E	Y	N	K	L	K	T	R	L	R	E	A
Template Known Secondary structure							T	T						.	.	.	.	.	.					S								.
Template Predicted Secondary structure														.	.	.	.	.	.													.
Template SS confidence
		655	.	.	.	.	660	.	.	.	.	.	.							.	.	.	670	.	.	.	.	.	.	.	.		.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.