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Job DescriptionP20099
Confidence62.63%DateThu Jan 5 11:37:46 GMT 2012
Rank107Aligned Residues197
% Identity11%Templatec2djiA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:pyruvate oxidase; PDBTitle: crystal structure of pyruvate oxidase from aerococcus2 viridans containing fad
Resolution1.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   88.90.........100.........110.........120.........130.........140.........150.........160.......
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Query Sequence  DEALDLIHQQHKRIREAYGPASIFAGSYGWRSNGVLHKASTLLQRYMALAGGYTGHLGDYSTGAAQAIMPYVVGGSEVYQ
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Template Sequence  AQDIDAAVELLNN. . . . . . SKRPVIYAGIGTMG. . . . . HGPAVQELARKIKAPVITTG. KNFETFEWDFEALTGSTYRVG
Template Known Secondary structure  T......
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GGGTT.....
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TTB


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   194.....200...... ...210.........220 .........230.........240 .........250.........260.
 
   168.170.........180.........190.........200.........210.........220.........230.........240.......
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Query Sequence  QQTSWPLVLEHSDVVVLWSANPLNTLKIAWNASDEQGLSYFSALRDSGKKLICIDPMRSETVDFFGDKMEWVAPHMGTDV
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Template Sequence  WKPA. NETILEADTVLFAGSNFPFSEVEGTF. . . . . . . . . . . . . . RNVDNFIQIDIDPAMLGKR. HHADVAIL. . . . GDA
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TTTTTTTTT..............TT
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GGGTTSS.S

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   262... ....270.........280.........290. ........300.........310 ........ .320.
 
   248.250.........260.........270.........280.........290.........300.........310.........320......
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Query Sequence  ALMLGIAHTLVENGWHDEAFLARCTTGYAVFASYLLGESDGIAKTAEWAAEICGVGAAKIRELAAIFHQNTTMLMAGWG
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Template Sequence  ALAIDEILNKVDA. VEESAWWTANLKNIANWREYI. . . . . . . . . NMLETKEEGDLQFYQVYNAINNHADEDAIYSIDVG
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   322.......330.... .....340.........350..... ....360.........370.........380.........390
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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