Job Description P20099 Confidence 52.21% Date Thu Jan 5 11:37:46 GMT 2012 Rank 121 Aligned Residues 178 % Identity 16% Template c2decA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:325aa long hypothetical protein; PDBTitle: crystal structure of the ph0510 protein from pyrococcus horikoshii ot3 Resolution 1.70 Å

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		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.		.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
Predicted Secondary structure																		.
Query SS confidence																		.
Query Sequence		E	A	L	D	L	I	H	Q	Q	H	K	R	I	R	E	A	.	Y	G	P	A	S	I	F	A	G	S	Y	G	W	R	S	N	G	V	L	H	K	A	S	T	L	L	Q	R	Y	M	A	L	A	G	G	Y	T	G	H	L	G	D	Y	S	T	G	A	A	Q	A	I	M	P	Y	V	V	G	G	S	E	V	Y	Q
Query Conservation																		.
Alig confidence																		.												.	.	.	.	.																				.	.	.	.	.	.	.	.	.
Template Conservation																														.	.	.	.	.																				.	.	.	.	.	.	.	.	.
Template Sequence		D	G	I	I	K	A	D	K	V	F	N	K	V	K	D	K	I	S	L	P	N	R	I	L	Y	L	G	C	.	.	.	.	.	G	S	S	H	F	L	S	K	L	L	A	M	V	T	N	M	H	G	G	.	.	.	.	.	.	.	.	.	L	G	I	A	L	P	C	S	E	F	L	Y	S	K	E	T	Y	P	I
Template Known Secondary structure															T	T	T					S							S	.	.	.	.	.	T																T	T	S	.	.	.	.	.	.	.	.	.														G	G	G	S
Template Predicted Secondary structure																														.	.	.	.	.																				.	.	.	.	.	.	.	.	.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.						40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.										.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	Q	T	S	W	P	L	V	L	E	H	S	D	V	V	V	L	W	S	A	N	P	L	N	T	L	K	I	A	W	N	A	S	D	E	Q	G	L	S	Y	F	S	A	L	R	D	S	G	K	K	L	I	C	I	D	P	M	R	S	E	T	V	D	F	F	G	D	K	M	E	W	V	A	P	H	M	G	T	D	V
Query Conservation
Alig confidence				.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.
Template Conservation				.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.
Template Sequence		G	E	.	.	.	.	.	.	.	.	.	V	E	L	A	V	G	I	.	.	.	.	.	.	.	.	.	.	.	.	.	S	R	S	G	E	T	T	E	I	L	L	A	L	E	K	I	N	V	K	K	L	G	I	T	T	R	E	S	S	L	T	R	M	.	.	.	C	D	Y	S	L	V	V	P	A	I	E	E	S
Template Known Secondary structure			S	.	.	.	.	.	.	.	.	.		S						.	.	.	.	.	.	.	.	.	.	.	.	.		S	S	S											T			S							S	S	S	S						.	.	.	S	S											S
Template Predicted Secondary structure				.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.
Template SS confidence
		78	.										80	.	.	.	.	.	.														.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.				120	.	.	.	.	.	.	.	.	.	130	.	.
		248									.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
Predicted Secondary structure			.	.	.	.	.	.	.	.
Query SS confidence			.	.	.	.	.	.	.	.
Query Sequence		A	.	.	.	.	.	.	.	.	L	M	L	G	I	A	H	T	L	V	E	N	G	W	H	D	E	A	F	L	A	R	C	T	T	G	Y	A	V	F	A	S	Y	L	L	G	E	S	D	G	I	A	K	T	A	E	W	A	A	E	I	C	G	V	G	A	A	K	I	R	E	L	A	A	I	F	H	Q	N	T	T
Query Conservation			.	.	.	.	.	.	.	.
Alig confidence			.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.
Template Conservation																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.
Template Sequence		V	V	M	T	H	S	F	T	S	F	Y	F	A	Y	L	Q	L	L	R	Y	S	Y	G	L	P	P	L	N	A	G	E	I	S	K	A	T	E	K	S	L	E	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	R	Y	I	R	E	I	V	E	S	F	.	D	F	Q	N
Template Known Secondary structure		S	S																				T	T																		T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.			S
Template Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.
Template SS confidence
		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.																							.	.	.	.	.	180	.	.	.	.	.		.	.	.	.
		320	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	L	M	A	G	W	G	M	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	I	F	L	G	S	G	L	L
Template Known Secondary structure								T	T
Template Predicted Secondary structure
Template SS confidence
		190	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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