Job Description P20099 Confidence 55.05% Date Thu Jan 5 11:37:46 GMT 2012 Rank 114 Aligned Residues 190 % Identity 13% Template c2amlB_ PDB info PDB header:transferase Chain: B: PDB Molecule:sis domain protein; PDBTitle: crystal structure of lmo0035 protein (46906266) from listeria2 monocytogenes 4b f2365 at 1.50 a resolution Resolution 1.50 Å

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		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.							.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure																		.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.
Query Sequence		E	A	L	D	L	I	H	Q	Q	H	K	R	I	R	E	A	.	.	.	.	.	.	Y	G	P	A	S	I	F	A	G	S	Y	G	W	R	S	N	G	V	L	H	K	A	S	T	L	L	Q	R	Y	M	A	L	A	G	G	Y	T	G	H	L	G	D	Y	S	T	G	A	A	Q	A	I	M	P	Y	V	V	G	G
Query Conservation																		.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.											.	.	.	.	.																									.	.	.	.	.	.	.	.
Template Conservation																																		.	.	.	.	.																									.	.	.	.	.	.	.	.
Template Sequence		E	X	C	R	V	I	L	A	D	F	Q	T	N	A	E	K	L	E	S	L	V	K	N	G	A	K	E	W	L	I	L	A	.	.	.	.	.	T	G	S	S	L	N	A	A	Q	S	A	K	Y	Y	I	E	N	L	A	D	V	R	I	T	.	.	.	.	.	.	.	.	I	E	E	P	F	N	H	L	Y	Y	E
Template Known Secondary structure																							T	T			S							.	.	.	.	.																			S	S					.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																		.	.	.	.	.																									.	.	.	.	.	.	.	.
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.						.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.									70	.	.	.	.	.	.	.	.	.	80
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.		.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure																																																			.
Query SS confidence																																																			.
Query Sequence		S	E	V	Y	Q	Q	Q	T	S	W	P	L	V	L	E	H	S	D	V	V	V	L	W	S	A	N	P	L	N	T	L	K	I	A	W	N	A	S	D	E	Q	G	L	S	Y	F	S	A	L	.	R	D	S	G	K	K	L	I	C	I	D	P	M	R	S	E	T	V	D	F	F	G	D	K	M	E	W	V	A	P
Query Conservation																																																			.
Alig confidence							.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.																.																				.	.
Template Conservation							.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.																																				.	.
Template Sequence		K	L	S	S	H	.	.	.	.	.	.	.	.	.	.	.	L	D	L	V	I	G	I	S	.	.	.	.	.	.	.	.	.	.	Q	S	G	Q	S	T	S	T	I	S	A	L	E	R	V	K	K	E	A	S	V	P	V	V	A	L	T	S	D	V	T	S	E	I	A	.	.	E	F	A	D	I	T	L	D	I
Template Known Secondary structure					T	T	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	S	S	S		B																							S		T	T	S	G	G	G	.	.	G	G		S
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.																																				.	.
Template SS confidence
		81	.	.	.	.												.	.	.	.	90	.	.	.											.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.			.	130	.	.	.	.	.	.	.
		242	.	.	.	.														.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence							.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		H	M	G	T	D	.	.	.	.	.	.	.	.	.	.	.	.	.	V	A	L	M	L	G	I	A	H	T	L	V	E	N	G	W	H	D	E	A	F	L	A	R	C	T	T	G	Y	A	V	F	A	S	Y	L	L	G	E	S	D	G	I	A	K	T	A	E	W	A	A	E	I	C	G	V	G	A	A	K	I	R
Query Conservation							.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	S	G	K	E	R	V	G	Y	V	T	K	G	F	T	A	T	V	L	T	L	X	L	T	G	L	H	F	A	Y	K	T	V	Q	I	D	E	T	R	F	N	N	E	I	S	A	F	S	R	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	D	A	I	P	A	T	I	A	E	T	E	A	F	Y	E
Template Known Secondary structure		S						S	S	S		S																					T	T	S	S																.	.	.	.	.	.	.	.	.	.	.	.	.	.			T
Template Predicted Secondary structure																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.															.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
		309	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	A	A	I	F	H	Q	N	T	T	M	L	M	A	G	W	G	M	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	W	Q	E	E	F	A	T	A	P	K	F	T	A	I	G	Y	G	P	T
Template Known Secondary structure								T	T										T	T
Template Predicted Secondary structure
Template SS confidence
		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions