Job Description P20099 Confidence 89.78% Date Thu Jan 5 11:37:46 GMT 2012 Rank 74 Aligned Residues 185 % Identity 14% Template c2a3nA_ PDB info PDB header:sugar binding protein Chain: A: PDB Molecule:putative glucosamine-fructose-6-phosphate aminotransferase; PDBTitle: crystal structure of a putative glucosamine-fructose-6-phosphate2 aminotransferase (stm4540.s) from salmonella typhimurium lt2 at 1.353 a resolution Resolution 1.23 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	A	L	D	L	I	H	Q	Q	H	K	R	I	R	E	A	Y	G	P	A	S	I	F	A	G	S	Y	G	W	R	S	N	G	V	L	H	K	A	S	T	L	L	Q	R	Y	M	A	L	A	G	G	Y	T	G	H	L	G	D	Y	S	T	G	A	A	Q	A	I	M	P	Y	V	V	G	G	S	E	V	Y	Q	Q
Query Conservation
Alig confidence															.	.	.	.										.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.	.	.	.										.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	K	A	E	Q	V	A	D	E	I	Y	Q	A	.	.	.	.	G	F	S	S	L	F	F	A	S	.	.	.	.	.	V	G	G	S	L	A	P	X	X	A	I	N	E	F	A	K	E	L	T	T	L	P	V	Y	V	E	Q	A	A	E	L	I	H	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure															.	.	.	.			S							.	.	.	.	.		G	G	G																	S														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure															.	.	.	.										.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		28	.	30	.	.	.	.	.	.	.	.	.	40					.	.	.	.	.	.	.	.	.						50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	T	S	W	P	L	V	L	E	H	S	D	V	V	V	L	W	S	A	N	P	L	N	T	L	K	I	A	W	N	A	S	D	E	Q	G	L	S	Y	F	S	A	L	R	D	S	G	K	K	L	I	C	I	D	P	M	R	S	E	T	V	D	F	F	G	D	K	M	E	W	V	A	P	H	M	G	T	D	V	A
Query Conservation
Alig confidence		.	.	.																.	.	.	.	.	.	.	.	.	.																																			.	.
Template Conservation		.	.	.																.	.	.	.	.	.	.	.	.	.																																			.	.
Template Sequence		.	.	.	G	N	K	R	L	N	K	D	S	V	V	I	T	L	S	.	.	.	.	.	.	.	.	.	.	K	S	G	D	T	K	E	S	V	A	I	A	E	W	C	K	A	Q	G	I	R	V	V	A	I	T	K	N	A	D	S	P	L	A	.	.	Q	A	A	T	W	H	I	P	X	R	H	K	N	G	V	E
Template Known Secondary structure		.	.	.			T	T			T	T								.	.	.	.	.	.	.	.	.	.	S	S	S															T	T								S		T	T	S				.	.		T		S								S	S
Template Predicted Secondary structure		.	.	.																.	.	.	.	.	.	.	.	.	.																																			.	.
Template SS confidence
					84	.	.	.	.	.	90	.	.	.	.	.	.	.	.											.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.			.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
							249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
Predicted Secondary structure		.	.	.	.	.
Query SS confidence		.	.	.	.	.
Query Sequence		.	.	.	.	.	L	M	L	G	I	A	H	T	L	V	E	N	G	W	H	D	E	A	F	L	A	R	C	T	T	G	Y	A	V	F	A	S	Y	L	L	G	E	S	D	G	I	A	K	T	A	E	W	A	A	E	I	C	G	V	G	A	A	K	I	R	E	L	A	A	I	F	H	Q	N	T	T	M	L	M	A
Query Conservation		.	.	.	.	.
Alig confidence		.	.	.	.	.																.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.
Template Conservation																						.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.
Template Sequence		Y	E	Y	X	L	L	Y	W	L	F	F	R	V	L	S	R	N	N	E	F	.	.	.	.	.	.	.	.	.	A	S	Y	D	R	F	A	S	Q	L	E	I	L	.	.	.	.	.	.	.	P	A	N	L	L	K	A	K	Q	K	F	D	P	Q	A	D	A	I	A	S	R	Y	H	N	S	D	Y	X	X	W	V
Template Known Secondary structure																		T	T	S		.	.	.	.	.	.	.	.	.	T	T								G	G	G		.	.	.	.	.	.	.																							T	T		S
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.
Template SS confidence
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.										.	170	.	.	.	.	.	.	.	.	.	180	.								.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
		324	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	W	G	M	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	G	A	E	X
Template Known Secondary structure				G	G	G
Template Predicted Secondary structure
Template SS confidence
		213	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions