Job Description P76185 Confidence 99.94% Date Thu Jan 5 12:20:14 GMT 2012 Rank 5 Aligned Residues 215 % Identity 20% Template d1vf7a_ SCOP info HlyD-like secretion proteins HlyD-like secretion proteins HlyD-like secretion proteins Resolution 2.40

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		34	.	.	.	.	.	40	.	.		.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
Predicted Secondary structure											.
Query SS confidence											.
Query Sequence		W	T	R	D	G	K	I	R	A	.	E	Q	V	S	I	T	P	Q	V	S	G	R	I	V	E	L	N	I	K	D	N	Q	L	V	N	A	G	D	L	L	L	T	I	D	K	T	P	F	Q	I	A	E	L	N	A	Q	A	Q	L	A	K	A	Q	S	D	L	A	K	A	N	N	E	A	N	R	R	R	H	L	S
Query Conservation											.
Alig confidence											.																																																																				.	.	.
Template Conservation																																																																															.	.	.
Template Sequence		T	E	L	P	G	R	T	N	A	F	R	I	A	E	V	R	P	Q	V	N	G	I	I	L	K	R	L	F	K	E	G	S	D	V	K	A	G	Q	Q	L	Y	Q	I	D	P	A	T	Y	E	A	D	Y	Q	S	A	Q	A	N	L	A	S	T	Q	E	Q	A	Q	R	Y	K	L	L	V	A	D	Q	A	.	.	.
Template Known Secondary structure											S								S	S									S		S	S					T	T	S																																					T	T	S	.	.	.
Template Predicted Secondary structure																																																																															.	.	.
Template SS confidence
		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.			.	180	.	.	.	.	.	.	.	.	.	190
Predicted Secondary structure																																																																				.	.
Query SS confidence																																																																				.	.
Query Sequence		Q	N	F	I	S	A	E	E	L	D	T	A	N	L	N	V	K	A	M	Q	A	S	V	D	A	A	Q	A	T	L	K	Q	A	Q	W	Q	L	A	Q	T	E	I	R	A	P	V	S	G	W	V	T	N	L	T	T	R	I	G	D	Y	A	D	T	G	K	P	.	.	L	F	A	L	V	D	S	H	S	F	Y	V
Query Conservation																																																																				.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.																																																									.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	V	S	K	Q	Q	Y	A	D	A	N	A	A	Y	L	Q	S	K	A	A	V	E	Q	A	R	I	N	L	R	Y	T	K	V	L	S	P	I	S	G	R	I	G	R	S	A	V	T	E	G	A	L	V	T	N	G	Q	A	N	A	M	A	T	V	Q	Q	L	D	P	I	Y	V
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	S																												T	T					S	S	S							S	S		T	T					T	T		S	S		S							S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.
Template SS confidence
												106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
		191	.	.	.	.	.	.	.	.	200	.	.														.	.	.	.	.	.	.	210	.	.	.	.		.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.													.
Query SS confidence														.	.	.	.	.	.	.	.	.	.	.	.	.													.
Query Sequence		I	G	Y	F	E	E	T	K	L	R	H	I	.	.	.	.	.	.	.	.	.	.	.	.	.	R	E	G	A	P	A	Q	I	T	L	Y	S	.	D	N	K	T	L	Q	G	H	V	S	S	I	G	R	A	I	Y	D	Q	S	V	E	S	D	S	S	L	I	P	D	V	K	P	N	V	P	W	V	R	L	A	Q
Query Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.													.
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.													.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	V	T	Q	P	S	T	A	L	L	R	L	R	R	E	L	A	S	G	Q	L	E	R	A	G	D	N	A	A	K	V	S	L	K	L	E	D	G	S	Q	Y	P	L	E	G	R	L	E	F	S	E	V	S	V	D	E	G	T	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure																				T	S	S					T	T									T	T	S				S	S						S	S		S				S	S	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
		257	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	V	P	V	R	F	A	L	D	K	V	P	G	D	V	T	L	V	S	G	T	T	C	S	I	A	V	G
Query Conservation
Alig confidence											.	.
Template Conservation											.	.
Template Sequence		S	V	T	I	R	A	V	F	P	.	.	N	P	N	N	E	L	L	P	G	M	F	V	H	A	Q	L	Q
Template Known Secondary structure							B				.	.		S	S	S				T	T
Template Predicted Secondary structure											.	.
Template SS confidence
		235	.	.	.	.	240	.	.	.			.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions