Job Description P76185 Confidence 99.89% Date Thu Jan 5 12:20:14 GMT 2012 Rank 6 Aligned Residues 212 % Identity 15% Template c3h9iB_ PDB info PDB header:transport protein Chain: B: PDB Molecule:cation efflux system protein cusb; PDBTitle: crystal structure of the membrane fusion protein cusb from escherichia2 coli Resolution 3.40 Å

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		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.				.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
Predicted Secondary structure																	.	.	.																			.
Query SS confidence																	.	.	.																			.
Query Sequence		N	Y	Y	M	Q	S	P	W	T	R	D	G	K	I	R	.	.	.	A	E	Q	V	S	I	T	P	Q	V	S	G	R	I	V	E	L	N	.	I	K	D	N	Q	L	V	N	A	G	D	L	L	L	T	I	D	K	T	P	F	Q	I	A	E	L	N	A	Q	A	Q	L	A	K	A	Q	S	D	L	A	K	A	N
Query Conservation																	.	.	.																			.
Alig confidence																	.	.	.																			.																						.	.	.	.
Template Conservation																																																												.	.	.	.
Template Sequence		R	G	P	L	T	F	A	Q	S	F	P	A	N	V	S	Y	N	E	Y	Q	Y	A	I	V	Q	A	R	A	A	G	F	I	D	K	V	Y	P	L	T	V	G	D	K	V	Q	K	G	T	P	L	L	D	L	T	I	P	D	W	.	.	.	.	V	E	A	Q	S	E	Y	L	L	L	R	E	T	G	G	T	A	T
Template Known Secondary structure																	B		T	T									S									S			S	S					T	T												.	.	.	.													S
Template Predicted Secondary structure																																																												.	.	.	.
Template SS confidence
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.					.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	E	A	N	R	R	R	H	L	S	Q	N	F	I	S	A	E	E	L	D	T	A	N	L	N	V	K	A	M	Q	A	S	V	D	A	A	Q	A	T	L	K	Q	A	Q	W	Q	L	A	Q	T	E	I	R	A	P	V	S	G	W	V	T	N	L	T	T	R	I	G	D	Y	A	D	T	G	K	P	L	F	A	L
Query Conservation
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	T	E	G	I	L	E	R	L	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	A	G	M	P	E	A	D	I	R	R	L	I	A	T	Q	K	I	Q	T	R	F	T	L	K	A	P	I	D	G	V	I	T	A	F	D	L	R	A	G	M	N	I	A	K	D	N	V	V	A	K	I
Template Known Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			T																								S	S					S						S	S					S
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		177	.	.	180	.	.	.	.	.	.																			.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.		.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
Predicted Secondary structure																																		.
Query SS confidence																																		.
Query Sequence		V	D	S	H	S	F	Y	V	I	G	Y	F	E	E	T	K	L	R	H	I	R	E	G	A	P	A	Q	I	T	L	Y	S	.	D	N	K	T	L	Q	G	H	V	S	S	I	G	R	A	I	Y	D	Q	S	V	E	S	D	S	S	L	I	P	D	V	K	P	N	V	P	W	V	R	L	A	Q	R	V	P	V	R
Query Conservation																																		.
Alig confidence																																		.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	G	M	D	P	V	W	V	T	A	A	I	P	E	S	I	A	W	L	V	K	D	A	S	Q	F	T	L	T	V	P	A	R	P	D	K	T	L	T	I	R	K	W	T	L	L	P	G	V	D	A	A	T	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	L	Q	L	R
Template Known Secondary structure					S																			G	G	G						S	S				S															T	T	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.																						.	.	.	.	.
		262	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	A	L	D	K	V	P	G	D	V	T	L	V	S	G	T	T	C	S	I	A	V
Query Conservation
Alig confidence						.	.
Template Conservation						.	.
Template Sequence		L	E	V	D	.	.	N	A	D	E	A	L	K	P	G	M	N	A	W	L	Q	L
Template Known Secondary structure						.	.			S	S				T	T
Template Predicted Secondary structure						.	.
Template SS confidence
		298	.	300	.			.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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