Job Description P76185 Confidence 99.95% Date Thu Jan 5 12:20:14 GMT 2012 Rank 4 Aligned Residues 211 % Identity 22% Template c1t5eB_ PDB info PDB header:transport protein Chain: B: PDB Molecule:multidrug resistance protein mexa; PDBTitle: the structure of mexa Resolution 3.00 Å

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		37	.	.	40	.	.		.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
Predicted Secondary structure								.
Query SS confidence								.
Query Sequence		D	G	K	I	R	A	.	E	Q	V	S	I	T	P	Q	V	S	G	R	I	V	E	L	N	I	K	D	N	Q	L	V	N	A	G	D	L	L	L	T	I	D	K	T	P	F	Q	I	A	E	L	N	A	Q	A	Q	L	A	K	A	Q	S	D	L	A	K	A	N	N	E	A	N	R	R	R	H	L	S	Q	N	F
Query Conservation								.
Alig confidence								.																																																																				.	.	.	.	.	.
Template Conservation																																																																												.	.	.	.	.	.
Template Sequence		P	G	R	T	N	A	F	R	I	A	E	V	R	P	Q	V	N	G	I	I	L	K	R	L	F	K	E	G	S	D	V	K	A	G	Q	Q	L	Y	Q	I	D	P	A	T	Y	E	A	D	Y	Q	S	A	Q	A	N	L	A	S	T	Q	E	Q	A	Q	R	Y	K	L	L	V	A	D	Q	A	.	.	.	.	.	.
Template Known Secondary structure								S								S	S									S		T	T					T	T																																						T			.	.	.	.	.	.
Template Predicted Secondary structure																																																																												.	.	.	.	.	.
Template SS confidence
		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.			.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
Predicted Secondary structure																																																																	.	.
Query SS confidence																																																																	.	.
Query Sequence		I	S	A	E	E	L	D	T	A	N	L	N	V	K	A	M	Q	A	S	V	D	A	A	Q	A	T	L	K	Q	A	Q	W	Q	L	A	Q	T	E	I	R	A	P	V	S	G	W	V	T	N	L	T	T	R	I	G	D	Y	A	D	T	G	K	P	.	.	L	F	A	L	V	D	S	H	S	F	Y	V	I	G	Y
Query Conservation																																																																	.	.
Alig confidence		.	.	.	.	.	.	.																																																									.	.
Template Conservation		.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	V	S	K	Q	Q	Y	A	D	A	N	A	A	Y	L	Q	S	K	A	A	V	E	Q	A	R	I	N	L	R	Y	T	K	V	L	S	P	I	S	G	R	I	G	R	S	A	V	T	E	G	A	L	V	T	N	G	Q	A	N	A	M	A	T	V	Q	Q	L	D	P	I	Y	V	D	V	T
Template Known Secondary structure		.	.	.	.	.	.	.	S																												T	T					S	S	S							S	S		T	T					T	T		S	S		S							S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.
Template SS confidence
									106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
		194	.	.	.	.	.	200	.	.	.														.	.	.	.	.	.	210	.	.	.	.		.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.												.
Query SS confidence												.	.	.	.	.	.	.	.	.	.	.	.	.												.
Query Sequence		F	E	E	T	K	L	R	H	I	R	.	.	.	.	.	.	.	.	.	.	.	.	.	E	G	A	P	A	Q	I	T	L	Y	S	.	D	N	K	T	L	Q	G	H	V	S	S	I	G	R	A	I	Y	D	Q	S	V	E	S	D	S	S	L	I	P	D	V	K	P	N	V	P	W	V	R	L	A	Q	R	V	P
Query Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.												.
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.												.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	P	S	T	A	L	L	R	L	R	R	E	L	A	S	G	Q	L	E	R	A	G	D	N	A	A	K	V	S	L	K	L	E	D	G	S	Q	Y	P	L	E	G	R	L	E	F	S	E	V	S	V	D	E	G	T	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	V	T
Template Known Secondary structure																T	T		S					T	T									T	T	S												S						T	T	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.																						.	.	.
		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	R	F	A	L	D	K	V	P	G	D	V	T	L	V	S	G	T	T	C	S	I	A	V
Query Conservation
Alig confidence								.	.
Template Conservation								.	.
Template Sequence		I	R	A	V	F	P	.	.	N	P	N	N	E	L	L	P	G	M	F	V	H	A	Q	L
Template Known Secondary structure								.	.		G	G	G				T	T
Template Predicted Secondary structure								.	.
Template SS confidence
		238	.	240	.	.	.			.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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