Job Description P76173 Confidence 2.17% Date Thu Jan 5 12:20:06 GMT 2012 Rank 25 Aligned Residues 236 % Identity 11% Template c1fftF_ PDB info PDB header:oxidoreductase Chain: F: PDB Molecule:ubiquinol oxidase; PDBTitle: the structure of ubiquinol oxidase from escherichia coli Resolution 3.50 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	H	E	W	P	L	V	I	F	T	V	L	G	Q	C	V	V	G	A	L	I	V	S	G	I	G	W	F	A	A	K	N	D	A	D	R	Q	R	I	V	R	G	M	F	F	L	W	L	L	M	G	V	G	F	I	A	S	V	M	H	L	G	S	P	L	R	A	F	N	S	L	N	R	I	G	A	S	G	L	S
Query Conservation
Alig confidence																			.	.	.																																																			.	.	.	.	.	.	.	.
Template Conservation																			.	.	.																																																			.	.	.	.	.	.	.	.
Template Sequence		A	W	G	H	P	E	V	Y	I	L	I	L	P	V	F	G	V	.	.	.	F	S	E	I	A	A	T	F	S	R	K	R	L	F	G	Y	T	S	L	V	W	A	T	V	C	I	T	V	L	S	F	I	V	W	L	H	H	F	F	T	M	G	A	G	A	N	V	N	A	F	.	.	.	.	.	.	.	.	F	G
Template Known Secondary structure											T	T							.	.	.										T	S			S	S														T	T	S	S		G	G	G	G	T	T	T	T	T									.	.	.	.	.	.	.	.
Template Predicted Secondary structure																			.	.	.																																																			.	.	.	.	.	.	.	.
Template SS confidence
		281	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.				.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.									.	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.			.	.	.	.	.	150	.	.	.						.	.	.	.
Predicted Secondary structure																																																														.	.										.	.	.	.	.
Query SS confidence																																																														.	.										.	.	.	.	.
Query Sequence		N	E	I	A	A	G	S	I	F	F	A	V	G	G	L	W	W	L	V	A	V	I	G	K	M	P	Q	A	L	G	K	L	W	L	L	F	S	M	A	L	G	V	I	F	V	W	M	M	T	C	V	Y	Q	I	D	T	V	P	T	W	.	.	H	N	G	Y	T	T	L	A	F	.	.	.	.	.	F	L	T	V
Query Conservation																																																														.	.										.	.	.	.	.
Alig confidence																																																														.	.										.	.	.	.	.
Template Conservation
Template Sequence		I	T	T	M	I	I	A	I	P	T	G	V	K	I	F	N	W	L	F	T	M	Y	Q	G	R	I	V	F	H	S	A	M	L	W	T	I	G	F	I	V	T	F	S	V	G	G	M	T	G	V	L	L	A	V	P	G	A	D	F	V	L	H	N	S	L	F	L	I	A	H	F	H	N	V	I	I	G	G	V	V
Template Known Secondary structure							T	T													T	T	T	T						S																								T	S						T	T	T	T	B													T	T	T
Template Predicted Secondary structure
Template SS confidence
		350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.			.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure																																															.	.
Query SS confidence																																															.	.
Query Sequence		L	L	S	G	P	I	L	A	A	A	I	L	R	A	A	R	V	T	F	N	T	T	P	F	A	I	I	S	V	L	A	L	I	A	C	A	G	V	I	V	L	Q	G	L	S	.	.	L	A	S	I	H	S	S	V	Q	Q	A	S	A	L	V	P	D	Y	A	S	L	Q	V	W	R	V	V	L	L	C	A	G	L
Query Conservation																																															.	.
Alig confidence																																															.	.
Template Conservation
Template Sequence		F	G	C	F	A	G	M	T	Y	W	W	P	K	A	F	G	F	K	L	N	E	T	W	G	K	R	A	F	W	F	W	I	I	G	F	F	V	A	F	M	P	L	Y	A	L	G	F	M	G	M	T	R	R	L	S	Q	Q	I	D	P	Q	F	H	T	M	L	M	I	A	A	S	G	A	V	L	I	A	L	G	I
Template Known Secondary structure												S					S	S																															T	T		B	T	T		S					T	T
Template Predicted Secondary structure
Template SS confidence
		430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	C	W	L	C	P	L	I	R	R	R	E	P	H	V	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	C	L	V	I	Q	M	Y	V	S	I	R	D	R	D	Q
Template Known Secondary structure													S	S
Template Predicted Secondary structure
Template SS confidence
		510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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