Job Description P77183 Confidence 92.19% Date Thu Jan 5 12:26:07 GMT 2012 Rank 171 Aligned Residues 92 % Identity 26% Template c3lk7A_ PDB info PDB header:ligase Chain: A: PDB Molecule:udp-n-acetylmuramoylalanine--d-glutamate ligase; PDBTitle: the crystal structure of udp-n-acetylmuramoylalanine-d-2 glutamate (murd) ligase from streptococcus agalactiae to3 1.5a Resolution 1.50 Å

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		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.																					.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	L	M	I	Y	G	R	S	L	E	A	Q	A	T	A	S	L	A	A	A	T	G	Y	D	S	H	I	F	D	L	F	P	A	S	A	S	A	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	D	T	D	T	A	V	I	L	L	C	H	D	L	N	R	E	L	P	V	L	Q
Query Conservation																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	V	L	V	L	G	L	A	R	S	G	E	A	A	A	R	L	L	A	K	L	G	A	I	V	T	V	N	D	G	K	P	F	D	E	N	P	T	A	Q	S	L	L	E	E	G	I	K	V	V	C	G	S	H	P	L	E	L	L	D	E	D	F	C	Y	X	I	K	N	P	G	I	P	Y	N	N	P	X	V	K
Template Known Secondary structure									T	T	T											T	T								S	S		G	G	G										T	T						S				G	G	G	G	G	S									T	T	S		T	T	S
Template Predicted Secondary structure
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
		239	240	.	.	.	.	.	.	.																.	.	250	.	.	.	.	.	.				.	.	.	260	.	.	.	.	.	.	.	.	.	270
Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.
Query SS confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.
Query Sequence		A	A	R	E	A	K	P	F	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	G	A	L	G	S	Y	R	T	.	.	.	H	T	L	R	L	Q	K	L	H	E	L	G	W	S
Query Conservation											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.
Template Conservation
Template Sequence		K	A	L	E	K	Q	I	P	V	L	T	E	V	E	L	A	Y	L	V	S	E	S	Q	L	I	G	I	T	G	S	N	G	K	T	T	T	T	T	X	I	A	E	V	L	N	A	G	G	Q	R
Template Known Secondary structure						T	T																S								S	S																T	T
Template Predicted Secondary structure
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions