Return to main results Retrieve Phyre Job Id

Job DescriptionP77183
Confidence86.90%DateThu Jan 5 12:26:07 GMT 2012
Rank378Aligned Residues72
% Identity14%Templatec2ph5A_
PDB info PDB header:transferaseChain: A: PDB Molecule:homospermidine synthase; PDBTitle: crystal structure of the homospermidine synthase hss from legionella2 pneumophila in complex with nad, northeast structural genomics target3 lgr54
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   177..180.........190........ .200.........210 .........220.........
Predicted Secondary structure 




....





.......................










Query SS confidence 





















. . . .











. . . . . . . . . . . . . . . . . . . . . . .


















Query Sequence  CVRLMIYGRSLEAQATASLAAA. . . . TGYDSHIFDLFP. . . . . . . . . . . . . . . . . . . . . . . ASASAQIDTDTAVILLCHD
Query Conservation    

 




 

  

 

  ....

  
 
 
 

.......................       
  
 





 
Alig confidence 





















....











.......................


















Template Conservation    





 
 

 


  
 
  

  




 
  
 
  
 
  

      


 
 



  

 
 




 
 
Template Sequence  KNRFVILGFGCVGQALXPLIFEKFDIKPSQVTIIAAEGTKVDVAQQYGVSFKLQQITPQNYLEVIGSTLEENDFLIDVSI
Template Known Secondary structure 
S


SB


GGGSS

S

T




TTTTGGG

TT


S
Template Predicted Secondary structure 
































Template SS confidence 















































































   13......20.........30.........40.........50.........60.........70.........80.........90..
 
   230.........240........
Predicted Secondary structure 




Query SS confidence 


















Query Sequence  LNRELPVLQAAREAKPFYL
Query Conservation     
   
  

     

Alig confidence 


















Template Conservation        






 




Template Sequence  GISSLALIILCNQKGALYI
Template Known Secondary structure  SS
T
Template Predicted Secondary structure 







Template SS confidence 


















   93......100.........110.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions