Job Description P77183 Confidence 84.03% Date Thu Jan 5 12:26:07 GMT 2012 Rank 450 Aligned Residues 91 % Identity 18% Template c2dlnA_ PDB info PDB header:ligase(peptidoglycan synthesis) Chain: A: PDB Molecule:d-alanine--d-alanine ligase; PDBTitle: vancomycin resistance: structure of d-alanine:d-alanine2 ligase at 2.3 angstroms resolution Resolution 2.30 Å

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		177	.	.	180	.	.	.	.	.	.	.	.										.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.		.	.
Predicted Secondary structure														.	.	.	.	.	.	.	.	.																																.																									.
Query SS confidence														.	.	.	.	.	.	.	.	.																																.																									.
Query Sequence		C	V	R	L	M	I	Y	G	R	S	L	E	.	.	.	.	.	.	.	.	.	A	Q	A	T	A	S	L	A	A	A	T	G	Y	D	S	H	I	F	D	L	F	P	A	S	A	S	A	Q	I	D	T	.	D	T	A	V	I	L	L	C	H	D	L	N	R	E	L	P	V	L	Q	A	A	R	E	A	.	K	P
Query Conservation														.	.	.	.	.	.	.	.	.																																.																									.
Alig confidence														.	.	.	.	.	.	.	.	.																																.																									.
Template Conservation
Template Sequence		T	D	K	I	A	V	L	L	G	G	T	S	A	E	R	E	V	S	L	N	S	G	A	A	V	L	A	G	L	R	E	G	G	I	D	A	Y	P	V	D	P	K	E	V	D	V	T	Q	L	K	S	M	G	F	Q	K	V	F	I	A	L	H	G	R	G	G	E	D	G	T	L	Q	G	M	L	E	L	M	G	L
Template Known Secondary structure			S									S	S	T	T																		T	T								T	T	T	S		G	G	G	S	G	G	G	T										S	T	T	T	S	S											T
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		246	.	.	.	250	.	.	.	.								.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
Predicted Secondary structure											.	.	.	.	.	.	.
Query SS confidence											.	.	.	.	.	.	.
Query Sequence		F	Y	L	G	A	L	G	S	Y	.	.	.	.	.	.	.	R	T	H	T	L	R	L	Q	K	L	H	E	L	G	W	S
Query Conservation											.	.	.	.	.	.	.
Alig confidence					.	.	.				.	.	.	.	.	.	.
Template Conservation					.	.	.
Template Sequence		P	Y	T	.	.	.	G	S	G	V	M	A	S	A	L	S	M	D	K	L	R	S	K	L	L	W	Q	G	A	G	L	P
Template Known Secondary structure			B	S	.	.	.	S																						T	T
Template Predicted Secondary structure					.	.	.
Template SS confidence
		82	.	.				.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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