Job Description P75733 Confidence 28.03% Date Thu Jan 5 12:13:33 GMT 2012 Rank 25 Aligned Residues 194 % Identity 14% Template d2pora_ SCOP info Transmembrane beta-barrels Porins Porin Resolution 1.80

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		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	N	D	K	T	T	K	V	D	Y	L	H	S	F	G	A	K	Y	D	F	K	N	N	F	V	L	E	A	A	F	G	Q	A	E	G	Y	I	D	Q	Y	F	A	K	A	S	Y	K	F	D	I	A	G	S	P	L	T	T	S	Y	Q	F	Y	G	T	R	D	K	V	D	D	R	S	V	N	D	L	Y	D	G	T
Query Conservation
Alig confidence																.	.					.
Template Conservation																.	.					.
Template Sequence		D	E	R	L	T	A	E	D	N	P	V	L	L	Y	.	.	T	Y	S	A	.	G	A	F	S	V	A	A	S	M	S	D	G	K	V	G	E	T	S	E	D	D	A	Q	E	M	A	V	A	A	A	Y	T	F	G	N	Y	T	V	G	L	G	Y	E	K	I	D	S	P	D	T	A	L	M	A	D	M	E	Q	L
Template Known Secondary structure		T	T	S	S		B	T	T	B						.	.					.	T	T										S	B	S	T	T	S	S		B														T	T													S		T	T	T	S
Template Predicted Secondary structure																.	.					.
Template SS confidence
		108	.	110	.	.	.	.	.	.	.	.	.	120	.			.	.	.	.		.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
		291	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370
Predicted Secondary structure
Query SS confidence
Query Sequence		A	W	L	Q	A	L	T	F	G	Y	R	A	A	D	V	V	D	L	R	L	E	G	T	W	V	K	A	D	G	Q	Q	G	Y	F	L	Q	R	M	T	P	T	Y	A	S	S	N	G	R	L	D	I	W	W	D	N	R	S	D	F	N	A	N	G	E	K	A	V	F	F	G	A	M	Y	D	L	K	N	W	N	L
Query Conservation
Alig confidence										.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.
Template Conservation										.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.
Template Sequence		E	L	A	A	I	A	K	F	.	.	.	.	.	G	A	T	N	V	K	A	Y	Y	A	D	G	E	L	D	R	D	F	A	R	A	V	F	D	L	T	P	V	A	A	A	A	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	V	D	H	K	A	Y	G	L	S	V	D	S	T	F	G	A	.	.	.
Template Known Secondary structure										.	.	.	.	.	T	T																					T	T					S	S				.	.	.	.	.	.	.	.	.	.	.	.	.	.																T	T	.	.	.
Template Predicted Secondary structure										.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.
Template SS confidence
		185	.	.	.	.	190	.	.						.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.															.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
		371	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450
Predicted Secondary structure
Query SS confidence
Query Sequence		P	G	F	A	I	G	A	S	Y	V	Y	A	W	D	A	K	P	A	T	W	Q	S	N	P	D	A	Y	Y	D	K	N	R	T	I	E	E	S	A	Y	S	L	D	A	V	Y	T	I	Q	D	G	R	A	K	G	T	M	F	K	L	H	F	T	E	Y	D	N	H	S	D	I	P	S	W	G	G	G	Y	G	N	I
Query Conservation
Alig confidence		.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	T	T	V	G	G	Y	V	Q	V	L	D	I	D	T	I	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	V	T	Y	Y	G	L	G	A	S	Y	D	L	G	.	.	.	.	G	G	A	S	I	V	G	G	I	A	D	N	D	L	P	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		.	.													T	T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	T	T												S	S	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
				243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.																	.	260	.	.	.	.	.	.	.	.	.	270	.	.					.	.	.	.	.	.	.	280	.	.	.	.	.	.	.
		451	.	.	.	.	.	.	.	.	460	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	Q	D	E	R	D	V	K	F	M	V	I	A	P	F
Query Conservation
Alig confidence		.
Template Conservation		.
Template Sequence		.	N	S	D	M	V	A	D	L	G	V	K	F	K	F
Template Known Secondary structure		.	S
Template Predicted Secondary structure		.
Template SS confidence
			288	.	290	.	.	.	.	.	.	.	.	.	300	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions