Job Description P75733 Confidence 15.54% Date Thu Jan 5 12:13:33 GMT 2012 Rank 29 Aligned Residues 193 % Identity 13% Template c3brzA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:todx; PDBTitle: crystal structure of the pseudomonas putida toluene2 transporter todx Resolution 3.20 Å

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		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.					.	290	.	.	.	.	.	.	.
Predicted Secondary structure																																																																					.	.	.	.
Query SS confidence																																																																					.	.	.	.
Query Sequence		H	S	F	G	A	K	Y	D	F	K	N	N	F	V	L	E	A	A	F	G	Q	A	E	G	Y	I	D	Q	Y	F	A	K	A	S	Y	K	F	D	I	A	G	S	P	L	T	T	S	Y	Q	F	Y	G	T	R	D	K	V	D	D	R	S	V	N	D	L	Y	D	.	.	.	.	G	T	A	W	L	Q	A	L	T
Query Conservation																																																																					.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																					.	.	.	.
Template Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	R	L	G	L	T	Y	K	L	T	D	N	T	V	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	A	M	Y	N	F	K	T	S	V	G	D	L	E	G	K	A	T	L	S	A	I	S	G	D	G	A	V	L	P	L	D	G	D	I	R	V	K	N	F	E	M	P	A	S	L	T	L	G
Template Known Secondary structure											S	S	S				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								B																T	T	S																B
Template Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.																	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
		298	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	G	Y	R	A	A	D	V	V	D	L	R	L	E	G	T	W	V	K	A	D	G	Q	Q	G	Y	F	L	Q	R	M	T	P	T	Y	A	S	S	N	G	R	L	D	I	W	W	D	N	R	S	D	F	N	A	N	G	E	K	A	V	F	F	G	A	M	Y	D	L	K	N	W	N	L	P	G	F	A	I	G	A
Query Conservation
Alig confidence																																																.	.	.	.	.	.	.	.															.	.	.	.
Template Conservation																																																.	.	.	.	.	.	.	.															.	.	.	.
Template Sequence		L	A	H	Q	F	N	E	R	W	V	V	A	A	D	I	K	R	A	Y	W	G	D	V	M	D	S	M	N	V	A	F	I	S	Q	L	G	G	I	D	V	A	L	P	H	R	Y	.	.	.	.	.	.	.	.	Q	D	I	T	V	A	S	I	G	T	A	Y	K	Y	.	.	.	.	N	N	D	L	T	L	R	A
Template Known Secondary structure						S	S	S	S													T	T			S									S	S												.	.	.	.	.	.	.	.														S	.	.	.	.	S	S	S
Template Predicted Secondary structure																																																.	.	.	.	.	.	.	.															.	.	.	.
Template SS confidence
		285	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330									.	.	.	.	.	.	.	.	.	340	.	.	.	.					.	.	.	.	.	350	.	.
		378	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	Y	V	Y	A	W	D	A	K	P	A	T	W	Q	S	N	P	D	A	Y	Y	D	K	N	R	T	I	E	E	S	A	Y	S	L	D	A	V	Y	T	I	Q	D	G	R	A	K	G	T	M	F	K	L	H	F	T	E	Y	D	N	H	S	D	I	P	S	W	G	G	G	Y	G	N	I	F	Q	D	E	R	D	V
Query Conservation
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.																					.	.	.	.	.	.	.
Template Conservation																	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.																					.	.	.	.	.	.	.
Template Sequence		G	Y	S	Y	A	Q	L	I	L	P	V	I	P	A	Y	.	.	.	.	.	.	.	.	.	.	.	.	L	K	R	H	V	T	F	G	G	E	Y	D	F	D	.	.	.	.	K	D	S	R	I	N	L	A	I	S	F	G	L	R	E	R	V	M	L	R	.	.	.	.	.	.	.	Q	S	H	S	Q	I	N	A
Template Known Secondary structure											T	T	S				.	.	.	.	.	.	.	.	.	.	.	.		S											S	S	.	.	.	.	S	S																			.	.	.	.	.	.	.					B
Template Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.																					.	.	.	.	.	.	.
Template SS confidence
		353	.	.	.	.	.	.	360	.	.	.	.	.	.	.													.	.	370	.	.	.	.	.	.	.	.	.	380	.					.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.								.	.	.	.	.	.	.	.
		458	.	460	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	F	M	V	I	A	P	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	V	S	Y	S	K	N	F
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		426	.	.	.	430	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions