 |
Job Description | P31475 | Confidence | 55.27% | Date | Thu Jan 5 11:48:04 GMT 2012 |
Rank | 344 | Aligned Residues | 43 |
% Identity | 23% | Template | d2ofya1 |
SCOP info | lambda repressor-like DNA-binding domains
| lambda repressor-like DNA-binding domains
| SinR domain-like
|
Resolution | 1.70 |
|
  |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | P | L | S | A | Q | Q | L | A | A | Q | K | N | L | S | Y | V | L | A | E | K | L | A | Q | R | I | L | K | G | E | Y | E | P | G | T | I | L | P | G | E | I | E | L | G | E | Q | F | G | V | S | R | T | A | V | R | E |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |   |   |
|   |   |
|   |   |   |
|
|   |   |
|
|
|
|   |   |
|
|   |   |   |   |
|
|
|   |
|
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
| . | . | . | . | . | . | . |
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |
|   |   |   |   |   | . | . | . | . |   |   |   |   |
|
|   |   |
|
| . |
|   |
|   |
| . | . | . | . | . | . | . |
| . |
|   |   |
|
|
|   |   |   |
|
|
|   |   |   |
|
|   |
Template Sequence |   |
V | P | L | T | A | E | E | L | E | . |
. |
. |
. |
R | G | Q | R | L | G | E | L | L | R | . |
S | A | R | G | D | . |
. |
. |
. |
. |
. |
. |
X | . |
S | X | V | T | V | A | F | D | A | G | I | S | V | E | T | L | R | K |
Template Known Secondary structure |   |
|
|
|
|  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  | . |  |  |  | T | T | . | . | . | . | . | . | . | S | . |
|  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  | . |  |  |  |
|
| . | . | . | . | . | . | . |
| . |
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
4 | . | . | . | . | . | 10 | . | . | |
|
|
|
. | . | . | . | . | . | . | 20 | . | . | |
. | . | . | . | . | |
|
|
|
|
|
|
. | |
. | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|