 |
Job Description | P31475 | Confidence | 94.23% | Date | Thu Jan 5 11:48:04 GMT 2012 |
Rank | 125 | Aligned Residues | 38 |
% Identity | 16% | Template | d1p4xa2 |
SCOP info | DNA/RNA-binding 3-helical bundle
| "Winged helix" DNA-binding domain
| MarR-like transcriptional regulators
|
Resolution | 2.20 |
|
  |   |
33 | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | G | T | I | L | P | G | E | I | E | L | G | E | Q | F | G | V | S | R | T | A | V | R | E | A | V | K | T | L | T | A | K | G | M | V | L | P | R | P |
Query Conservation |   |
|
|   |   |
|
|
|
|   |   |
|
|   |   |   |   |
|
|
|   |
|
|
|   |
|
|   |   |
|   |   |   |
|
|
|   |   |   |   |
Alig confidence |   |
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |
| . |
|   |   |
|
|
|   |   |
|   |
|   |   |   |   |
|
|   |   |
|   |   |
|
|   |   |
|   |
|   |
|   |   |
Template Sequence |   |
N | K | N | I | V | . |
L | L | K | D | L | I | E | T | I | H | H | K | Y | P | Q | T | V | R | A | L | N | N | L | K | K | Q | G | Y | L | I | K | E | R |
Template Known Secondary structure |   |
T | T |
|
|  | . |  |  |  |  |  |  |  |  | S | S | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | S | S |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
| . |
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
171 | . | . | . | . | |
. | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|