Return to main results Retrieve Phyre Job Id

Job DescriptionP31475
Confidence96.15%DateThu Jan 5 11:48:04 GMT 2012
Rank64Aligned Residues84
% Identity21%Templated1jgsa_
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain MarR-like transcriptional regulators
Resolution2.30

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   38.40.........50.........60.........70. ........80.........90.........100.........110...
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Query Sequence  PGEIELGEQFGVSRTAVREAVKTLTAKGMVLPRP. . . . RIGTRVMPQSNWNFLDQELLTWWMTEENFHQVIDHFLVMRIC
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Template Sequence  ITPVELKKVLSVDLGALTRMLDRLVCKGWVERLPNPNDKRGVLVKLTTGGAAI. . . . . . . . . . . . . . . . . . . . CEQCHQL
Template Known Secondary structure  B
T

TTS
TT
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   55....60.........70.........80.........90.........100....... ..110....
 
   114.....120.........130.........140.
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Query Sequence  LEPQACLLAATVGTAEQKAHLNTLMAEM
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Template Conservation              
  

   
   
 

Template Sequence  VGQDLHQELTKNLTADEVATLEYLLKKV
Template Known Secondary structure  TTTTTT
TT
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   115....120.........130.........140..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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