Return to main results Retrieve Phyre Job Id

Job DescriptionP31475
Confidence53.18%DateThu Jan 5 11:48:04 GMT 2012
Rank360Aligned Residues57
% Identity12%Templated1fipa_
SCOP infoDNA/RNA-binding 3-helical bundle Homeodomain-like FIS-like
Resolution1.90

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.........60.
Predicted Secondary structure 

























Query SS confidence 


























































Query Sequence  LSAQQLAAQKNLSYVLAEKLAQRILKGEYEPGTILPGEIELGEQFGVSRTAVREAVKTL
Query Conservation             
   
   
   
  
   

  



  

    


 


 

  
Alig confidence 





























..


























Template Conservation                  
   
   
  

 ..   

   

  




 

  



 
Template Sequence  FAQLNGQDVNDLYELVLAEVEQALLDMVMQ. . YTRGNQTRAALMMGINRGTLRKKLKKY
Template Known Secondary structure  TT
SS


S
..TTT
TS
T
Template Predicted Secondary structure 



..





Template SS confidence 


























































   3940.........50.........60........ .70.........80.........90.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions