 |
Job Description | P31475 | Confidence | 93.31% | Date | Thu Jan 5 11:48:04 GMT 2012 |
Rank | 149 | Aligned Residues | 41 |
% Identity | 17% | Template | c3izbV_ |
PDB info |
PDB header:ribosome | Chain: V: PDB Molecule:40s ribosomal protein rps25 (s25e); |
PDBTitle: localization of the small subunit ribosomal proteins into a 6.1 a2 cryo-em map of saccharomyces cerevisiae translating 80s ribosome
|
Resolution | NULL Å |
|
  |   |
33 | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | G | T | I | L | P | G | E | I | E | L | G | E | Q | F | G | V | S | R | T | A | V | R | E | A | V | K | T | L | T | A | K | G | M | V | L | P | R | P | R | I |
Query Conservation |   |
|
|   |   |
|
|
|
|   |   |
|
|   |   |   |   |
|
|
|   |
|
|
|   |
|
|   |   |
|   |   |   |
|
|
|   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |
|   |
|
|
|
|   |
|
|
|
|
|
|
|   |   |
|
|
|
|
|   |
|
|   |
|   |   |   |
|   |
|   |   |
|   |   |   |
Template Sequence |   |
P | T | Y | R | Y | V | S | V | S | V | L | V | D | R | L | K | I | G | G | S | L | A | R | I | A | L | R | H | L | E | K | E | G | I | I | K | P | I | S | K | H |
Template Known Secondary structure |   |
T | T | S | S |  |  |  |  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | S |
|  |  |
|
|
| S |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
55 | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|