Job Description P31475 Confidence 100.00% Date Thu Jan 5 11:48:04 GMT 2012 Rank 3 Aligned Residues 193 % Identity 23% Template c3fmsA_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:transcriptional regulator, gntr family; PDBTitle: crystal structure of tm0439, a gntr transcriptional2 regulator Resolution 2.20 Å

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		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	L	S	Y	V	L	A	E	K	L	A	Q	R	I	L	K	G	E	Y	E	P	G	T	I	L	P	G	E	I	E	L	G	E	Q	F	G	V	S	R	T	A	V	R	E	A	V	K	T	L	T	A	K	G	M	V	L	P	R	P	R	I	G	T	R	V	M	P	Q	S	N	W	N	F	L	D	Q	E	L	L	T
Query Conservation
Alig confidence																												.																																																	.	.	.	.	.
Template Conservation																												.																																																	.	.	.	.	.
Template Sequence		L	V	R	T	K	V	Y	N	L	L	K	E	X	I	L	N	H	E	L	K	L	G	E	K	L	N	.	V	R	E	L	S	E	K	L	G	I	S	F	T	P	V	R	D	A	L	L	Q	L	A	T	E	G	L	V	K	V	V	P	R	V	G	F	F	V	T	D	V	D	E	K	F	I	R	E	.	.	.	.	.
Template Known Secondary structure																	T	T	S	S		T	T		B			.									T																	T	S					T	T	T															.	.	.	.	.
Template Predicted Secondary structure																												.																																																	.	.	.	.	.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.		.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	W	M	T	E	E	N	F	H	Q	V	I	D	H	F	L	V	M	R	I	C	L	E	P	Q	A	C	L	L	A	A	T	V	G	T	A	E	Q	K	A	H	L	N	T	L	M	A	E	M	A	A	L	K	E	N	F	R	R	E	R	W	I	E	V	D	M	A	W	H	E	H	I	Y	E	M	S	A	N	P	F
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	I	E	T	R	I	X	X	E	V	F	C	L	E	N	Y	F	D	K	I	A	G	S	.	.	E	E	L	L	E	I	K	G	E	I	D	D	V	A	A	S	A	A	R	E	I	F	D	D	S	D	E	R	L	H	K	L	F	I	R	A	S	G	N	E	L
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.																S						T		.	.																																				T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.
Template SS confidence
																82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.			.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	T	S	F	A	S	L	F	H	S	V	Y	H	T	Y	F	T	S	I	T	S	D	T	V	I	K	L	D	L	H	Q	A	I	V	D	A	I	I	Q	S	D	G	D	A	A	F	K	A	C	Q	A	L	L	R	S	P
Query Conservation
Alig confidence																				.
Template Conservation																				.
Template Sequence		I	I	S	L	Y	E	K	I	W	D	R	I	D	L	V	R	H	L	.	N	E	R	Y	V	V	S	N	R	E	H	K	E	L	I	E	R	I	I	S	G	D	K	E	G	A	I	E	K	L	K	E	H	L	K	N	V
Template Known Secondary structure									T										T	.																				T	T
Template Predicted Secondary structure																				.
Template SS confidence
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.		.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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