Return to main results Retrieve Phyre Job Id

Job DescriptionP31475
Confidence95.73%DateThu Jan 5 11:48:04 GMT 2012
Rank85Aligned Residues87
% Identity7%Templatec3fm5D_
PDB info PDB header:transcription regulatorChain: D: PDB Molecule:transcriptional regulator; PDBTitle: x-ray crystal structure of transcriptional regulator (marr family)2 from rhodococcus sp. rha1
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   34.....40.........50.........60.........70.... .....80.........90.........100.........110..
Predicted Secondary structure 














.


Query SS confidence 








































.





































Query Sequence  GTILPGEIELGEQFGVSRTAVREAVKTLTAKGMVLPRPRIG. TRVMPQSNWNFLDQELLTWWMTEENFHQVIDHFLVMRI
Query Conservation 
  



  

    


 


 

  
   


      
.  
                                 
 
Alig confidence 



.



































.









....................







Template Conservation      .
   

        


  
  
   
 
 
     
 
 
 

  
....................        
Template Sequence  AEGV. NQRGVAATXGLDPSQIVGLVDELEERGLVVRTLDPSDNKLIAATEEG. . . . . . . . . . . . . . . . . . . . RRLRDDAK
Template Known Secondary structure  SS
.T

TTS
TT


....................
Template Predicted Secondary structure 



.















....................
Template SS confidence 















































































   50... ......60.........70.........80.........90.........100 ........
 
   113......120.........130.........140.
Predicted Secondary structure 

Query SS confidence 




























Query Sequence  CLEPQACLLAATVGTAEQKAHLNTLMAEM
Query Conservation   

                  
       
Alig confidence 




























Template Conservation               
  

       
 

Template Sequence  ARVDAAHGRYFEGIPDTVVNQXRDTLQSI
Template Known Secondary structure  TTS
Template Predicted Secondary structure 



Template SS confidence 




























   111........120.........130.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions