Return to main results Retrieve Phyre Job Id

Job DescriptionP31475
Confidence99.72%DateThu Jan 5 11:48:04 GMT 2012
Rank13Aligned Residues65
% Identity34%Templatec3f8mA_
PDB info PDB header:transcriptionChain: A: PDB Molecule:gntr-family protein transcriptional regulator; PDBTitle: crystal structure of phnf from mycobacterium smegmatis
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   14.....20.........30.........40.........50.........60.........70.........
Predicted Secondary structure 





















Query SS confidence 

































































Query Sequence  LSYVLAEKLAQRILKGEYEPGTILPGEIELGEQFGVSRTAVREAVKTLTAKGMVLPRPRIGTRVMP
Query Conservation 
   
   
   
  
   

  



  

    


 


 

  
   


      
  
  
Alig confidence 















.
















































Template Conservation 
  


  
   
  
.   
 




  

   



 


 

  
   


 
  
 

 
  
Template Sequence  LKHQVVRAELDRMLDG. MRIGDPFPAEREIAEQFEVARETVRQALRELLIDGRVERRGRTTVVARP
Template Known Secondary structure 
.

TT
B


TT

TTSTT


Template Predicted Secondary structure 


.



















Template SS confidence 

































































   10.........20..... ....30.........40.........50.........60.........70....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions