Return to main results Retrieve Phyre Job Id

Job DescriptionP31475
Confidence48.15%DateThu Jan 5 11:48:04 GMT 2012
Rank396Aligned Residues40
% Identity10%Templatec3dpjB_
PDB info PDB header:dna binding proteinChain: B: PDB Molecule:transcription regulator, tetr family; PDBTitle: the crystal structure of a tetr transcription regulator2 from silicibacter pomeroyi dss
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   11........20.........30.........40.........50....
Predicted Secondary structure 

















Query SS confidence 











































Query Sequence  QKNLSYVLAEKLAQRILKGEYEPGTILPGEIELGEQFGVSRTAV
Query Conservation     
   
   
   
  
   

  



  

    


 

Alig confidence 




















...


.















Template Conservation 
  

  

 

  
    
 ...   .

  

  



  

Template Sequence  QAQTRDQIVAAADELFYRQGF. . . AQT. SFVDISAAVGISRGNF
Template Known Secondary structure  TT
S...TT
.
T

Template Predicted Secondary structure 

...


.



Template SS confidence 











































   3......10.........20... ... ...30.........40..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions