Return to main results Retrieve Phyre Job Id

Job DescriptionP31475
Confidence36.99%DateThu Jan 5 11:48:04 GMT 2012
Rank482Aligned Residues36
% Identity14%Templatec3clcC_
PDB info PDB header:transcription regulator/dnaChain: C: PDB Molecule:regulatory protein; PDBTitle: crystal structure of the restriction-modification controller protein2 c.esp1396i tetramer in complex with its natural 35 base-pair operator
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   14.....20.........30.........40.........50......
Predicted Secondary structure 














Query SS confidence 










































Query Sequence  LSYVLAEKLAQRILKGEYEPGTILPGEIELGEQFGVSRTAVRE
Query Conservation 
   
   
   
  
   

  



  

    


 


 
Alig confidence 

















.......

















Template Conservation 
    
  

  
    
.......

  

   


 
 

 
Template Sequence  LLSKVSFVIKKIRLEKGM. . . . . . . TQEDLAYKSNLDRTYISG
Template Known Secondary structure  TT
.......
TTS
Template Predicted Secondary structure 


.......


Template SS confidence 










































   5....10.........20.. .......30.........40
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions